Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC5.76□□□□□ -1.49
NR1H2P55055 AC098483.2-201ENST00000603158 454 ntBASIC5.76□□□□□ -1.49
NR1H2P55055 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.76□□□□□ -1.49
NR1H2P55055 AP001962.1-201ENST00000624114 559 ntBASIC5.76□□□□□ -1.49
NR1H2P55055 AC005618.4-201ENST00000625053 554 ntBASIC5.76□□□□□ -1.49
NR1H2P55055 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.76□□□□□ -1.49
NR1H2P55055 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NR1H2P55055 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NR1H2P55055 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
NR1H2P55055 LRRC37A15P-201ENST00000514785 1355 ntBASIC5.76□□□□□ -1.49
NR1H2P55055 TCP11X1-202ENST00000622971 1372 ntBASIC5.76□□□□□ -1.49
NR1H2P55055 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
NR1H2P55055 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NR1H2P55055 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NR1H2P55055 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NR1H2P55055 NXF4-202ENST00000416098 1465 ntBASIC5.76□□□□□ -1.49
NR1H2P55055 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NR1H2P55055 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NR1H2P55055 PSMC1P6-201ENST00000477233 1319 ntBASIC5.75□□□□□ -1.49
NR1H2P55055 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.75□□□□□ -1.49
NR1H2P55055 IFIT1P1-201ENST00000400497 1449 ntBASIC5.75□□□□□ -1.49
NR1H2P55055 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.75□□□□□ -1.49
NR1H2P55055 AL359715.4-201ENST00000606629 1436 ntBASIC5.75□□□□□ -1.49
NR1H2P55055 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.75□□□□□ -1.49
NR1H2P55055 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.75□□□□□ -1.49
NR1H2P55055 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NR1H2P55055 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NR1H2P55055 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.75□□□□□ -1.49
NR1H2P55055 RNU6-666P-201ENST00000363499 107 ntBASIC5.75□□□□□ -1.49
NR1H2P55055 RN7SKP128-201ENST00000364270 303 ntBASIC5.75□□□□□ -1.49
NR1H2P55055 RNU6-650P-201ENST00000365658 111 ntBASIC5.75□□□□□ -1.49
NR1H2P55055 U3.52-201ENST00000384034 216 ntBASIC5.75□□□□□ -1.49
NR1H2P55055 HMGB1P10-201ENST00000395823 563 ntBASIC5.75□□□□□ -1.49
NR1H2P55055 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NR1H2P55055 METTL15P3-201ENST00000415522 1221 ntBASIC5.75□□□□□ -1.49
NR1H2P55055 HMGN2P27-201ENST00000427352 270 ntBASIC5.75□□□□□ -1.49
NR1H2P55055 GAPDHP33-201ENST00000443168 1013 ntBASIC5.75□□□□□ -1.49
NR1H2P55055 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.75□□□□□ -1.49
NR1H2P55055 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
NR1H2P55055 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.75□□□□□ -1.49
NR1H2P55055 AC008410.1-201ENST00000483777 339 ntBASIC5.75□□□□□ -1.49
NR1H2P55055 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NR1H2P55055 AC090958.1-201ENST00000511122 351 ntBASIC5.75□□□□□ -1.49
NR1H2P55055 TOMM22P4-201ENST00000511318 336 ntBASIC5.75□□□□□ -1.49
NR1H2P55055 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.75□□□□□ -1.49
NR1H2P55055 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NR1H2P55055 IGLVIV-66-1-201ENST00000521832 460 ntBASIC5.75□□□□□ -1.49
NR1H2P55055 OR4A46P-201ENST00000527255 933 ntBASIC5.75□□□□□ -1.49
NR1H2P55055 TOMM20P1-201ENST00000534518 427 ntBASIC5.75□□□□□ -1.49
NR1H2P55055 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
NR1H2P55055 AC244502.2-201ENST00000543361 851 ntBASIC5.75□□□□□ -1.49
NR1H2P55055 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.75□□□□□ -1.49
NR1H2P55055 AC093510.2-201ENST00000562820 896 ntBASIC5.75□□□□□ -1.49
NR1H2P55055 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.75□□□□□ -1.49
NR1H2P55055 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC5.75□□□□□ -1.49
NR1H2P55055 ZNF322P1-201ENST00000568013 1209 ntBASIC5.75□□□□□ -1.49
NR1H2P55055 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.75□□□□□ -1.49
NR1H2P55055 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.75□□□□□ -1.49
NR1H2P55055 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
NR1H2P55055 AC015982.1-201ENST00000608113 465 ntBASIC5.75□□□□□ -1.49
NR1H2P55055 AC006249.1-201ENST00000621223 471 ntBASIC5.75□□□□□ -1.49
NR1H2P55055 AC021766.1-201ENST00000624404 741 ntBASIC5.75□□□□□ -1.49
NR1H2P55055 AC111152.1-202ENST00000635848 339 ntBASIC5.75□□□□□ -1.49
NR1H2P55055 AC099654.6-201ENST00000636487 512 ntBASIC5.75□□□□□ -1.49
NR1H2P55055 MIR1910-201ENST00000636955 80 ntBASIC5.75□□□□□ -1.49
NR1H2P55055 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.75□□□□□ -1.49
NR1H2P55055 HDAC1P2-201ENST00000453661 1398 ntBASIC5.75□□□□□ -1.49
NR1H2P55055 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.75□□□□□ -1.49
NR1H2P55055 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.75□□□□□ -1.49
NR1H2P55055 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
NR1H2P55055 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NR1H2P55055 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NR1H2P55055 AC097063.1-201ENST00000426714 1797 ntBASIC5.75□□□□□ -1.49
NR1H2P55055 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NR1H2P55055 AC239868.2-201ENST00000564237 4527 ntBASIC5.75□□□□□ -1.49
NR1H2P55055 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.74□□□□□ -1.49
NR1H2P55055 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
NR1H2P55055 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NR1H2P55055 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
NR1H2P55055 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.74□□□□□ -1.49
NR1H2P55055 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NR1H2P55055 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.74□□□□□ -1.49
NR1H2P55055 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.74□□□□□ -1.49
NR1H2P55055 AC125336.1-201ENST00000508893 2827 ntBASIC5.74□□□□□ -1.49
NR1H2P55055 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NR1H2P55055 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
NR1H2P55055 AL359092.1-201ENST00000417156 265 ntBASIC5.74□□□□□ -1.49
NR1H2P55055 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.74□□□□□ -1.49
NR1H2P55055 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.74□□□□□ -1.49
NR1H2P55055 MARK2P12-201ENST00000420129 585 ntBASIC5.74□□□□□ -1.49
NR1H2P55055 AL160175.1-201ENST00000428124 247 ntBASIC5.74□□□□□ -1.49
NR1H2P55055 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.74□□□□□ -1.49
NR1H2P55055 AC022022.1-201ENST00000430304 178 ntBASIC5.74□□□□□ -1.49
NR1H2P55055 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.74□□□□□ -1.49
NR1H2P55055 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.74□□□□□ -1.49
NR1H2P55055 PSMD10P2-201ENST00000432890 672 ntBASIC5.74□□□□□ -1.49
NR1H2P55055 CYCSP11-201ENST00000436426 315 ntBASIC5.74□□□□□ -1.49
NR1H2P55055 ARMC4P1-201ENST00000438905 707 ntBASIC5.74□□□□□ -1.49
NR1H2P55055 AL020997.1-201ENST00000446554 349 ntBASIC5.74□□□□□ -1.49
NR1H2P55055 AC096741.1-201ENST00000472250 846 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms