Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.98□□□□□ -1.45
PTPN9P43378 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.98□□□□□ -1.45
PTPN9P43378 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PTPN9P43378 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.98□□□□□ -1.45
PTPN9P43378 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.98□□□□□ -1.45
PTPN9P43378 TXNP2-201ENST00000443918 295 ntBASIC5.98□□□□□ -1.45
PTPN9P43378 AP006222.1-205ENST00000450734 457 ntBASIC5.98□□□□□ -1.45
PTPN9P43378 MTND2P39-201ENST00000457230 764 ntBASIC5.98□□□□□ -1.45
PTPN9P43378 AC104849.1-201ENST00000462623 405 ntBASIC5.98□□□□□ -1.45
PTPN9P43378 RPSAP37-201ENST00000470913 821 ntBASIC5.98□□□□□ -1.45
PTPN9P43378 RPS7P6-201ENST00000485777 579 ntBASIC5.98□□□□□ -1.45
PTPN9P43378 RPL32P33-201ENST00000487023 394 ntBASIC5.98□□□□□ -1.45
PTPN9P43378 DUTP1-201ENST00000493631 470 ntBASIC5.98□□□□□ -1.45
PTPN9P43378 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.98□□□□□ -1.45
PTPN9P43378 AC108157.1-201ENST00000510511 539 ntBASIC5.98□□□□□ -1.45
PTPN9P43378 SNORA70.20-201ENST00000516848 126 ntBASIC5.98□□□□□ -1.45
PTPN9P43378 OR4R2P-201ENST00000530815 597 ntBASIC5.98□□□□□ -1.45
PTPN9P43378 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.98□□□□□ -1.45
PTPN9P43378 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.98□□□□□ -1.45
PTPN9P43378 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.98□□□□□ -1.45
PTPN9P43378 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC5.98□□□□□ -1.45
PTPN9P43378 AC139697.1-201ENST00000548429 745 ntBASIC5.98□□□□□ -1.45
PTPN9P43378 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5.98□□□□□ -1.45
PTPN9P43378 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.98□□□□□ -1.45
PTPN9P43378 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.98□□□□□ -1.45
PTPN9P43378 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.98□□□□□ -1.45
PTPN9P43378 OR4H6P-202ENST00000603819 340 ntBASIC5.98□□□□□ -1.45
PTPN9P43378 AL096712.1-201ENST00000614561 159 ntBASIC5.98□□□□□ -1.45
PTPN9P43378 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.98□□□□□ -1.45
PTPN9P43378 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.98□□□□□ -1.45
PTPN9P43378 AC006453.5-201ENST00000636451 619 ntBASIC5.98□□□□□ -1.45
PTPN9P43378 AL137141.1-201ENST00000624622 4836 ntBASIC5.98□□□□□ -1.45
PTPN9P43378 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
PTPN9P43378 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PTPN9P43378 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
PTPN9P43378 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
PTPN9P43378 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PTPN9P43378 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.98□□□□□ -1.45
PTPN9P43378 AL078595.2-201ENST00000605309 1780 ntBASIC5.98□□□□□ -1.45
PTPN9P43378 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.98□□□□□ -1.45
PTPN9P43378 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
PTPN9P43378 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PTPN9P43378 MSL3P1-202ENST00000440028 1468 ntBASIC5.97□□□□□ -1.45
PTPN9P43378 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
PTPN9P43378 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.97□□□□□ -1.45
PTPN9P43378 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PTPN9P43378 AC005261.6-201ENST00000623072 1387 ntBASIC5.97□□□□□ -1.45
PTPN9P43378 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.97□□□□□ -1.45
PTPN9P43378 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PTPN9P43378 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PTPN9P43378 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.97□□□□□ -1.45
PTPN9P43378 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PTPN9P43378 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
PTPN9P43378 OOSP1-201ENST00000398992 1270 ntBASIC5.97□□□□□ -1.45
PTPN9P43378 HMGN1P20-201ENST00000411849 300 ntBASIC5.97□□□□□ -1.45
PTPN9P43378 AC245060.4-201ENST00000413293 1121 ntBASIC5.97□□□□□ -1.45
PTPN9P43378 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.97□□□□□ -1.45
PTPN9P43378 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.97□□□□□ -1.45
PTPN9P43378 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.97□□□□□ -1.45
PTPN9P43378 AL022331.1-201ENST00000429025 477 ntBASIC5.97□□□□□ -1.45
PTPN9P43378 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.97□□□□□ -1.45
PTPN9P43378 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.97□□□□□ -1.45
PTPN9P43378 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.97□□□□□ -1.45
PTPN9P43378 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.97□□□□□ -1.45
PTPN9P43378 RPS3AP15-201ENST00000483874 781 ntBASIC5.97□□□□□ -1.45
PTPN9P43378 AC090058.1-201ENST00000498788 435 ntBASIC5.97□□□□□ -1.45
PTPN9P43378 AC006499.4-201ENST00000510947 694 ntBASIC5.97□□□□□ -1.45
PTPN9P43378 AC112206.4-201ENST00000515142 405 ntBASIC5.97□□□□□ -1.45
PTPN9P43378 SEC11B-201ENST00000518383 499 ntBASIC5.97□□□□□ -1.45
PTPN9P43378 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.97□□□□□ -1.45
PTPN9P43378 OR4A46P-201ENST00000527255 933 ntBASIC5.97□□□□□ -1.45
PTPN9P43378 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.97□□□□□ -1.45
PTPN9P43378 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.97□□□□□ -1.45
PTPN9P43378 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.97□□□□□ -1.45
PTPN9P43378 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.97□□□□□ -1.45
PTPN9P43378 AC074029.2-201ENST00000551045 634 ntBASIC5.97□□□□□ -1.45
PTPN9P43378 DPPA2P4-201ENST00000563717 878 ntBASIC5.97□□□□□ -1.45
PTPN9P43378 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.97□□□□□ -1.45
PTPN9P43378 AC122134.1-202ENST00000569111 1201 ntBASIC5.97□□□□□ -1.45
PTPN9P43378 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.97□□□□□ -1.45
PTPN9P43378 OOSP1P2-201ENST00000579644 351 ntBASIC5.97□□□□□ -1.45
PTPN9P43378 AC005726.4-201ENST00000582858 458 ntBASIC5.97□□□□□ -1.45
PTPN9P43378 AL365181.4-201ENST00000609800 547 ntBASIC5.97□□□□□ -1.45
PTPN9P43378 RN7SL544P-201ENST00000617232 284 ntBASIC5.97□□□□□ -1.45
PTPN9P43378 RN7SL763P-201ENST00000620922 284 ntBASIC5.97□□□□□ -1.45
PTPN9P43378 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.97□□□□□ -1.45
PTPN9P43378 AC097372.4-201ENST00000625025 466 ntBASIC5.97□□□□□ -1.45
PTPN9P43378 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PTPN9P43378 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.97□□□□□ -1.45
PTPN9P43378 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.97□□□□□ -1.45
PTPN9P43378 MIR1910-201ENST00000636955 80 ntBASIC5.97□□□□□ -1.45
PTPN9P43378 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PTPN9P43378 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
PTPN9P43378 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
PTPN9P43378 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.97□□□□□ -1.45
PTPN9P43378 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PTPN9P43378 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.97□□□□□ -1.45
PTPN9P43378 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.45
PTPN9P43378 AC093671.1-201ENST00000624981 2929 ntBASIC5.96□□□□□ -1.45
PTPN9P43378 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms