Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SNORD116-30-201ENST00000516468 85 ntBASIC7.08□□□□□ -1.28
COL15A1P39059 CDH12P4-201ENST00000517835 295 ntBASIC7.08□□□□□ -1.28
COL15A1P39059 CDH12P3-201ENST00000517935 295 ntBASIC7.08□□□□□ -1.28
COL15A1P39059 CDH12P1-201ENST00000518435 295 ntBASIC7.08□□□□□ -1.28
COL15A1P39059 AC006518.1-201ENST00000541449 943 ntBASIC7.08□□□□□ -1.28
COL15A1P39059 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC7.08□□□□□ -1.28
COL15A1P39059 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL15A1P39059 AC106730.2-201ENST00000566641 540 ntBASIC7.08□□□□□ -1.28
COL15A1P39059 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC7.08□□□□□ -1.28
COL15A1P39059 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
COL15A1P39059 MIR4436B2-201ENST00000581415 91 ntBASIC7.08□□□□□ -1.28
COL15A1P39059 MIR4436B1-201ENST00000583272 91 ntBASIC7.08□□□□□ -1.28
COL15A1P39059 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC7.08□□□□□ -1.28
COL15A1P39059 CDC42EP3P1-201ENST00000601004 764 ntBASIC7.08□□□□□ -1.28
COL15A1P39059 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC7.08□□□□□ -1.28
COL15A1P39059 AL049539.1-201ENST00000611964 459 ntBASIC7.08□□□□□ -1.28
COL15A1P39059 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC7.08□□□□□ -1.28
COL15A1P39059 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL15A1P39059 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL15A1P39059 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL15A1P39059 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC7.08□□□□□ -1.28
COL15A1P39059 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL15A1P39059 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL15A1P39059 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
COL15A1P39059 ZNF658B-201ENST00000602828 3408 ntBASIC7.08□□□□□ -1.28
COL15A1P39059 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL15A1P39059 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
COL15A1P39059 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL15A1P39059 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC7.08□□□□□ -1.28
COL15A1P39059 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL15A1P39059 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL15A1P39059 RN7SKP115-201ENST00000363177 317 ntBASIC7.08□□□□□ -1.28
COL15A1P39059 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL15A1P39059 RNGTTP1-201ENST00000420965 728 ntBASIC7.08□□□□□ -1.28
COL15A1P39059 DSTNP5-201ENST00000427921 523 ntBASIC7.08□□□□□ -1.28
COL15A1P39059 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC7.08□□□□□ -1.28
COL15A1P39059 BX679664.2-201ENST00000439282 283 ntBASIC7.08□□□□□ -1.28
COL15A1P39059 H2AFZP6-201ENST00000444403 394 ntBASIC7.08□□□□□ -1.28
COL15A1P39059 HESX1-202ENST00000473921 757 ntTSL 5 BASIC7.08□□□□□ -1.28
COL15A1P39059 RPS18P6-201ENST00000476880 458 ntBASIC7.08□□□□□ -1.28
COL15A1P39059 NDUFB5P1-201ENST00000508134 564 ntBASIC7.08□□□□□ -1.28
COL15A1P39059 AP000676.2-201ENST00000529711 301 ntBASIC7.08□□□□□ -1.28
COL15A1P39059 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC7.08□□□□□ -1.28
COL15A1P39059 AC133644.2-201ENST00000608142 540 ntBASIC7.08□□□□□ -1.28
COL15A1P39059 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC7.08□□□□□ -1.28
COL15A1P39059 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC7.07□□□□□ -1.28
COL15A1P39059 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC7.07□□□□□ -1.28
COL15A1P39059 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL15A1P39059 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC7.07□□□□□ -1.28
COL15A1P39059 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL15A1P39059 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL15A1P39059 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL15A1P39059 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL15A1P39059 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL15A1P39059 OR5T3-201ENST00000303059 1023 ntBASIC7.07□□□□□ -1.28
COL15A1P39059 MIR551A-201ENST00000385042 96 ntBASIC7.07□□□□□ -1.28
COL15A1P39059 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
COL15A1P39059 RNU4-64P-201ENST00000410795 131 ntBASIC7.07□□□□□ -1.28
COL15A1P39059 RNF10P1-201ENST00000418589 369 ntBASIC7.07□□□□□ -1.28
COL15A1P39059 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC7.07□□□□□ -1.28
COL15A1P39059 VN1R54P-201ENST00000435210 1049 ntBASIC7.07□□□□□ -1.28
COL15A1P39059 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC7.07□□□□□ -1.28
COL15A1P39059 AC105399.1-202ENST00000447303 205 ntBASIC7.07□□□□□ -1.28
COL15A1P39059 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL15A1P39059 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC7.07□□□□□ -1.28
COL15A1P39059 RN7SL860P-201ENST00000473738 223 ntBASIC7.07□□□□□ -1.28
COL15A1P39059 RPS7P6-201ENST00000485777 579 ntBASIC7.07□□□□□ -1.28
COL15A1P39059 LDHC-203ENST00000535809 757 ntTSL 5 BASIC7.07□□□□□ -1.28
COL15A1P39059 LDHC-205ENST00000537486 583 ntTSL 5 BASIC7.07□□□□□ -1.28
COL15A1P39059 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC7.07□□□□□ -1.28
COL15A1P39059 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
COL15A1P39059 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC7.07□□□□□ -1.28
COL15A1P39059 AL513327.3-201ENST00000602618 469 ntBASIC7.07□□□□□ -1.28
COL15A1P39059 AL133481.2-203ENST00000607558 139 ntBASIC7.07□□□□□ -1.28
COL15A1P39059 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC7.07□□□□□ -1.28
COL15A1P39059 WBP1LP8-201ENST00000617401 327 ntBASIC7.07□□□□□ -1.28
COL15A1P39059 WWOX-217ENST00000620008 450 ntTSL 2 BASIC7.07□□□□□ -1.28
COL15A1P39059 AP001784.1-201ENST00000624107 428 ntBASIC7.07□□□□□ -1.28
COL15A1P39059 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC7.07□□□□□ -1.28
COL15A1P39059 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL15A1P39059 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.06□□□□□ -1.28
COL15A1P39059 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL15A1P39059 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL15A1P39059 AC073365.1-203ENST00000641055 1992 ntBASIC7.06□□□□□ -1.28
COL15A1P39059 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL15A1P39059 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC7.06□□□□□ -1.28
COL15A1P39059 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL15A1P39059 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL15A1P39059 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC7.06□□□□□ -1.28
COL15A1P39059 AC006206.1-201ENST00000544842 3387 ntBASIC7.06□□□□□ -1.28
COL15A1P39059 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL15A1P39059 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
COL15A1P39059 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL15A1P39059 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL15A1P39059 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
COL15A1P39059 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL15A1P39059 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL15A1P39059 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC7.06□□□□□ -1.28
COL15A1P39059 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL15A1P39059 RNU1-136P-201ENST00000384181 164 ntBASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms