Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.44□□□□□ -1.54
RORAP35398 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RORAP35398 AC019322.1-201ENST00000571869 389 ntBASIC5.44□□□□□ -1.54
RORAP35398 AC025857.2-201ENST00000602711 238 ntBASIC5.44□□□□□ -1.54
RORAP35398 AC008115.3-201ENST00000614874 549 ntBASIC5.44□□□□□ -1.54
RORAP35398 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RORAP35398 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
RORAP35398 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RORAP35398 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
RORAP35398 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
RORAP35398 AL161756.3-201ENST00000641216 2071 ntBASIC5.44□□□□□ -1.54
RORAP35398 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RORAP35398 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.44□□□□□ -1.54
RORAP35398 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RORAP35398 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RORAP35398 CR788268.1-201ENST00000603931 1809 ntBASIC5.44□□□□□ -1.54
RORAP35398 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
RORAP35398 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RORAP35398 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RORAP35398 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.43□□□□□ -1.54
RORAP35398 MFSD8-219ENST00000641228 2559 ntBASIC5.43□□□□□ -1.54
RORAP35398 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
RORAP35398 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
RORAP35398 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
RORAP35398 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RORAP35398 RN7SKP124-201ENST00000364730 341 ntBASIC5.43□□□□□ -1.54
RORAP35398 RNA5SP131-201ENST00000365452 119 ntBASIC5.43□□□□□ -1.54
RORAP35398 GTF3AP1-201ENST00000416942 1004 ntBASIC5.43□□□□□ -1.54
RORAP35398 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.43□□□□□ -1.54
RORAP35398 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.43□□□□□ -1.54
RORAP35398 TNPO1P1-201ENST00000423641 1138 ntBASIC5.43□□□□□ -1.54
RORAP35398 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.43□□□□□ -1.54
RORAP35398 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.43□□□□□ -1.54
RORAP35398 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.43□□□□□ -1.54
RORAP35398 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.43□□□□□ -1.54
RORAP35398 AC073410.1-201ENST00000435125 589 ntBASIC5.43□□□□□ -1.54
RORAP35398 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
RORAP35398 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.43□□□□□ -1.54
RORAP35398 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.43□□□□□ -1.54
RORAP35398 DUTP7-201ENST00000507982 486 ntBASIC5.43□□□□□ -1.54
RORAP35398 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.43□□□□□ -1.54
RORAP35398 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RORAP35398 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.43□□□□□ -1.54
RORAP35398 AC020937.1-201ENST00000519677 1013 ntBASIC5.43□□□□□ -1.54
RORAP35398 NRBF2P4-201ENST00000520874 850 ntBASIC5.43□□□□□ -1.54
RORAP35398 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.43□□□□□ -1.54
RORAP35398 AC136777.2-201ENST00000522979 358 ntBASIC5.43□□□□□ -1.54
RORAP35398 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.43□□□□□ -1.54
RORAP35398 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.43□□□□□ -1.54
RORAP35398 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.43□□□□□ -1.54
RORAP35398 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.43□□□□□ -1.54
RORAP35398 AC105036.1-201ENST00000566222 271 ntBASIC5.43□□□□□ -1.54
RORAP35398 AC007448.1-201ENST00000582714 234 ntBASIC5.43□□□□□ -1.54
RORAP35398 AP000864.1-201ENST00000609424 650 ntBASIC5.43□□□□□ -1.54
RORAP35398 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
RORAP35398 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
RORAP35398 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RORAP35398 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
RORAP35398 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RORAP35398 FBXL21-201ENST00000297158 1305 ntBASIC5.43□□□□□ -1.54
RORAP35398 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RORAP35398 LINC01963-201ENST00000562038 3148 ntBASIC5.43□□□□□ -1.54
RORAP35398 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.43□□□□□ -1.54
RORAP35398 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RORAP35398 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RORAP35398 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RORAP35398 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RORAP35398 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RORAP35398 CDC27P2-201ENST00000425026 1922 ntBASIC5.42□□□□□ -1.54
RORAP35398 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.42□□□□□ -1.54
RORAP35398 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RORAP35398 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.42□□□□□ -1.54
RORAP35398 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.42□□□□□ -1.54
RORAP35398 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RORAP35398 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
RORAP35398 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
RORAP35398 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.42□□□□□ -1.54
RORAP35398 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.42□□□□□ -1.54
RORAP35398 NIFKP3-201ENST00000417799 865 ntBASIC5.42□□□□□ -1.54
RORAP35398 AC234781.4-201ENST00000419384 244 ntBASIC5.42□□□□□ -1.54
RORAP35398 NENFP1-201ENST00000419476 466 ntBASIC5.42□□□□□ -1.54
RORAP35398 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.42□□□□□ -1.54
RORAP35398 AL590399.2-201ENST00000427536 309 ntBASIC5.42□□□□□ -1.54
RORAP35398 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.42□□□□□ -1.54
RORAP35398 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.42□□□□□ -1.54
RORAP35398 NPM1P19-201ENST00000450070 712 ntBASIC5.42□□□□□ -1.54
RORAP35398 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RORAP35398 AC087672.1-201ENST00000479876 766 ntBASIC5.42□□□□□ -1.54
RORAP35398 AC006539.1-201ENST00000481419 501 ntBASIC5.42□□□□□ -1.54
RORAP35398 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.42□□□□□ -1.54
RORAP35398 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.42□□□□□ -1.54
RORAP35398 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.42□□□□□ -1.54
RORAP35398 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
RORAP35398 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.42□□□□□ -1.54
RORAP35398 AC079395.2-201ENST00000610982 737 ntBASIC5.42□□□□□ -1.54
RORAP35398 AL390318.1-201ENST00000624564 687 ntBASIC5.42□□□□□ -1.54
RORAP35398 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.42□□□□□ -1.54
RORAP35398 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RORAP35398 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.42□□□□□ -1.54
RORAP35398 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms