Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 RN7SL763P-201ENST00000620922 284 ntBASIC5.54□□□□□ -1.52
RPA3P35244 AL390318.1-201ENST00000624564 687 ntBASIC5.54□□□□□ -1.52
RPA3P35244 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.54□□□□□ -1.52
RPA3P35244 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RPA3P35244 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RPA3P35244 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RPA3P35244 AC137056.2-201ENST00000624055 1958 ntBASIC5.54□□□□□ -1.52
RPA3P35244 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RPA3P35244 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.54□□□□□ -1.52
RPA3P35244 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.54□□□□□ -1.52
RPA3P35244 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.54□□□□□ -1.52
RPA3P35244 GTF2IP4-201ENST00000453092 2054 ntBASIC5.54□□□□□ -1.52
RPA3P35244 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RPA3P35244 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RPA3P35244 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
RPA3P35244 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.53□□□□□ -1.52
RPA3P35244 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
RPA3P35244 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
RPA3P35244 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.53□□□□□ -1.52
RPA3P35244 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
RPA3P35244 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.53□□□□□ -1.52
RPA3P35244 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RPA3P35244 SNORD56.6-201ENST00000384569 71 ntBASIC5.53□□□□□ -1.52
RPA3P35244 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
RPA3P35244 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.53□□□□□ -1.52
RPA3P35244 AC127526.2-201ENST00000426436 775 ntBASIC5.53□□□□□ -1.52
RPA3P35244 RPL7AP49-201ENST00000429522 581 ntBASIC5.53□□□□□ -1.52
RPA3P35244 AL591438.1-201ENST00000433508 581 ntBASIC5.53□□□□□ -1.52
RPA3P35244 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.53□□□□□ -1.52
RPA3P35244 MORF4L2P1-201ENST00000503761 858 ntBASIC5.53□□□□□ -1.52
RPA3P35244 PSMA2P2-201ENST00000504319 686 ntBASIC5.53□□□□□ -1.52
RPA3P35244 AC090568.1-201ENST00000509499 856 ntBASIC5.53□□□□□ -1.52
RPA3P35244 AC016559.2-201ENST00000510759 359 ntBASIC5.53□□□□□ -1.52
RPA3P35244 AC098976.1-201ENST00000513014 541 ntBASIC5.53□□□□□ -1.52
RPA3P35244 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RPA3P35244 SNORD46.2-201ENST00000516021 102 ntBASIC5.53□□□□□ -1.52
RPA3P35244 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.53□□□□□ -1.52
RPA3P35244 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.53□□□□□ -1.52
RPA3P35244 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.53□□□□□ -1.52
RPA3P35244 HMGB1P42-201ENST00000532126 553 ntBASIC5.53□□□□□ -1.52
RPA3P35244 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.53□□□□□ -1.52
RPA3P35244 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.53□□□□□ -1.52
RPA3P35244 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.53□□□□□ -1.52
RPA3P35244 AP005431.1-201ENST00000618479 319 ntBASIC5.53□□□□□ -1.52
RPA3P35244 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.53□□□□□ -1.52
RPA3P35244 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RPA3P35244 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
RPA3P35244 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RPA3P35244 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.53□□□□□ -1.52
RPA3P35244 AC015689.2-201ENST00000528172 1738 ntBASIC5.53□□□□□ -1.52
RPA3P35244 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RPA3P35244 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.53□□□□□ -1.52
RPA3P35244 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
RPA3P35244 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RPA3P35244 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RPA3P35244 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.52□□□□□ -1.53
RPA3P35244 Z83820.1-201ENST00000456978 1499 ntBASIC5.52□□□□□ -1.53
RPA3P35244 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
RPA3P35244 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RPA3P35244 BRAFP1-201ENST00000445336 2703 ntBASIC5.52□□□□□ -1.53
RPA3P35244 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.52□□□□□ -1.53
RPA3P35244 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
RPA3P35244 RNA5SP30-201ENST00000365552 115 ntBASIC5.52□□□□□ -1.53
RPA3P35244 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.52□□□□□ -1.53
RPA3P35244 RNA5SP284-201ENST00000384547 118 ntBASIC5.52□□□□□ -1.53
RPA3P35244 RNU6-316P-201ENST00000391027 107 ntBASIC5.52□□□□□ -1.53
RPA3P35244 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
RPA3P35244 HMGB1P20-201ENST00000402555 677 ntBASIC5.52□□□□□ -1.53
RPA3P35244 RMRPP5-201ENST00000411156 267 ntBASIC5.52□□□□□ -1.53
RPA3P35244 NENFP1-201ENST00000419476 466 ntBASIC5.52□□□□□ -1.53
RPA3P35244 BX119321.1-201ENST00000428912 797 ntBASIC5.52□□□□□ -1.53
RPA3P35244 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.52□□□□□ -1.53
RPA3P35244 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.52□□□□□ -1.53
RPA3P35244 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.52□□□□□ -1.53
RPA3P35244 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.52□□□□□ -1.53
RPA3P35244 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.52□□□□□ -1.53
RPA3P35244 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.52□□□□□ -1.53
RPA3P35244 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.52□□□□□ -1.53
RPA3P35244 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.52□□□□□ -1.53
RPA3P35244 RPSAP37-201ENST00000470913 821 ntBASIC5.52□□□□□ -1.53
RPA3P35244 AC109481.1-201ENST00000509173 282 ntBASIC5.52□□□□□ -1.53
RPA3P35244 CYCSP22-201ENST00000517555 339 ntBASIC5.52□□□□□ -1.53
RPA3P35244 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.52□□□□□ -1.53
RPA3P35244 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.52□□□□□ -1.53
RPA3P35244 IGBP1P1-201ENST00000554337 1009 ntBASIC5.52□□□□□ -1.53
RPA3P35244 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
RPA3P35244 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.52□□□□□ -1.53
RPA3P35244 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.52□□□□□ -1.53
RPA3P35244 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.52□□□□□ -1.53
RPA3P35244 AC106730.2-201ENST00000566641 540 ntBASIC5.52□□□□□ -1.53
RPA3P35244 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.52□□□□□ -1.53
RPA3P35244 AC008521.2-201ENST00000591021 259 ntBASIC5.52□□□□□ -1.53
RPA3P35244 uc_338.7-201ENST00000621834 124 ntBASIC5.52□□□□□ -1.53
RPA3P35244 AC091932.2-201ENST00000623014 291 ntBASIC5.52□□□□□ -1.53
RPA3P35244 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RPA3P35244 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
RPA3P35244 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RPA3P35244 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
RPA3P35244 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.52□□□□□ -1.53
RPA3P35244 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms