Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC008171.1-201ENST00000395058 200 ntBASIC6.37□□□□□ -1.39
COL4A5P29400 GLULP6-201ENST00000399502 913 ntBASIC6.37□□□□□ -1.39
COL4A5P29400 NUDT19P3-201ENST00000404698 555 ntBASIC6.37□□□□□ -1.39
COL4A5P29400 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.37□□□□□ -1.39
COL4A5P29400 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC6.37□□□□□ -1.39
COL4A5P29400 AC069213.2-201ENST00000420238 366 ntBASIC6.37□□□□□ -1.39
COL4A5P29400 AC004074.1-201ENST00000421810 1063 ntBASIC6.37□□□□□ -1.39
COL4A5P29400 RPL7P11-201ENST00000437586 658 ntBASIC6.37□□□□□ -1.39
COL4A5P29400 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC6.37□□□□□ -1.39
COL4A5P29400 RN7SL481P-201ENST00000477764 299 ntBASIC6.37□□□□□ -1.39
COL4A5P29400 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC6.37□□□□□ -1.39
COL4A5P29400 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
COL4A5P29400 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.37□□□□□ -1.39
COL4A5P29400 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6.37□□□□□ -1.39
COL4A5P29400 AC068831.8-201ENST00000620171 435 ntBASIC6.37□□□□□ -1.39
COL4A5P29400 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.37□□□□□ -1.39
COL4A5P29400 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL4A5P29400 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.37□□□□□ -1.39
COL4A5P29400 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
COL4A5P29400 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
COL4A5P29400 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COL4A5P29400 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL4A5P29400 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL4A5P29400 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.36□□□□□ -1.39
COL4A5P29400 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL4A5P29400 RNGTTP1-201ENST00000420965 728 ntBASIC6.36□□□□□ -1.39
COL4A5P29400 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.36□□□□□ -1.39
COL4A5P29400 CYCSP42-201ENST00000450823 238 ntBASIC6.36□□□□□ -1.39
COL4A5P29400 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC6.36□□□□□ -1.39
COL4A5P29400 AC020898.1-201ENST00000474167 787 ntBASIC6.36□□□□□ -1.39
COL4A5P29400 HMGN2P25-201ENST00000486956 268 ntBASIC6.36□□□□□ -1.39
COL4A5P29400 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.36□□□□□ -1.39
COL4A5P29400 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC6.36□□□□□ -1.39
COL4A5P29400 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL4A5P29400 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.36□□□□□ -1.39
COL4A5P29400 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL4A5P29400 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.36□□□□□ -1.39
COL4A5P29400 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC6.36□□□□□ -1.39
COL4A5P29400 AC008814.1-201ENST00000603797 406 ntBASIC6.36□□□□□ -1.39
COL4A5P29400 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL4A5P29400 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL4A5P29400 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL4A5P29400 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL4A5P29400 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL4A5P29400 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
COL4A5P29400 AL008638.3-201ENST00000623027 5182 ntBASIC6.36□□□□□ -1.39
COL4A5P29400 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL4A5P29400 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
COL4A5P29400 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
COL4A5P29400 AC008124.1-201ENST00000609803 9730 ntBASIC6.36□□□□□ -1.39
COL4A5P29400 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
COL4A5P29400 CCDC162P-202ENST00000368966 6751 ntBASIC6.36□□□□□ -1.39
COL4A5P29400 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL4A5P29400 SNORD56.6-201ENST00000384569 71 ntBASIC6.36□□□□□ -1.39
COL4A5P29400 RPS4XP9-201ENST00000405151 780 ntBASIC6.36□□□□□ -1.39
COL4A5P29400 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.36□□□□□ -1.39
COL4A5P29400 AC009963.2-201ENST00000453431 138 ntBASIC6.36□□□□□ -1.39
COL4A5P29400 AC026979.1-201ENST00000492525 396 ntBASIC6.36□□□□□ -1.39
COL4A5P29400 AC140172.1-201ENST00000502928 141 ntBASIC6.36□□□□□ -1.39
COL4A5P29400 MRPS33P2-201ENST00000507850 322 ntBASIC6.36□□□□□ -1.39
COL4A5P29400 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC6.36□□□□□ -1.39
COL4A5P29400 RNA5SP43-201ENST00000516559 110 ntBASIC6.36□□□□□ -1.39
COL4A5P29400 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.36□□□□□ -1.39
COL4A5P29400 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC6.36□□□□□ -1.39
COL4A5P29400 AL683813.2-201ENST00000605245 502 ntBASIC6.36□□□□□ -1.39
COL4A5P29400 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.36□□□□□ -1.39
COL4A5P29400 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
COL4A5P29400 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL4A5P29400 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
COL4A5P29400 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.35□□□□□ -1.39
COL4A5P29400 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.35□□□□□ -1.39
COL4A5P29400 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC6.35□□□□□ -1.39
COL4A5P29400 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.35□□□□□ -1.39
COL4A5P29400 CAST-222ENST00000508579 1758 ntTSL 2 BASIC6.35□□□□□ -1.39
COL4A5P29400 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL4A5P29400 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL4A5P29400 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC6.35□□□□□ -1.39
COL4A5P29400 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.35□□□□□ -1.39
COL4A5P29400 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL4A5P29400 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL4A5P29400 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL4A5P29400 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
COL4A5P29400 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.35□□□□□ -1.39
COL4A5P29400 RPL32P3-201ENST00000359025 275 ntBASIC6.35□□□□□ -1.39
COL4A5P29400 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
COL4A5P29400 MIR600-201ENST00000385007 98 ntBASIC6.35□□□□□ -1.39
COL4A5P29400 RNA5SP332-201ENST00000391063 115 ntBASIC6.35□□□□□ -1.39
COL4A5P29400 AL121977.1-201ENST00000401636 979 ntBASIC6.35□□□□□ -1.39
COL4A5P29400 RIMKLBP2-201ENST00000424737 654 ntBASIC6.35□□□□□ -1.39
COL4A5P29400 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
COL4A5P29400 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC6.35□□□□□ -1.39
COL4A5P29400 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC6.35□□□□□ -1.39
COL4A5P29400 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC6.35□□□□□ -1.39
COL4A5P29400 AC011487.3-201ENST00000593607 453 ntBASIC6.35□□□□□ -1.39
COL4A5P29400 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.35□□□□□ -1.39
COL4A5P29400 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6.35□□□□□ -1.39
COL4A5P29400 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL4A5P29400 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
COL4A5P29400 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.35□□□□□ -1.39
COL4A5P29400 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms