Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 RMRPP5-201ENST00000411156 267 ntBASIC4.86□□□□□ -1.63
USF1P22415 AL596448.1-201ENST00000415024 392 ntBASIC4.86□□□□□ -1.63
USF1P22415 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.86□□□□□ -1.63
USF1P22415 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.86□□□□□ -1.63
USF1P22415 RPL5P2-201ENST00000429598 854 ntBASIC4.86□□□□□ -1.63
USF1P22415 AC073410.1-201ENST00000435125 589 ntBASIC4.86□□□□□ -1.63
USF1P22415 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.86□□□□□ -1.63
USF1P22415 AL161722.1-201ENST00000446972 1032 ntBASIC4.86□□□□□ -1.63
USF1P22415 SDC4P-201ENST00000453285 601 ntBASIC4.86□□□□□ -1.63
USF1P22415 AC007386.1-201ENST00000455212 582 ntBASIC4.86□□□□□ -1.63
USF1P22415 ACA64.4-201ENST00000459070 127 ntBASIC4.86□□□□□ -1.63
USF1P22415 RN7SL72P-201ENST00000460697 269 ntBASIC4.86□□□□□ -1.63
USF1P22415 OR2AO1P-201ENST00000476497 403 ntBASIC4.86□□□□□ -1.63
USF1P22415 RN7SL184P-201ENST00000488308 297 ntBASIC4.86□□□□□ -1.63
USF1P22415 AC138409.2-202ENST00000507274 458 ntBASIC4.86□□□□□ -1.63
USF1P22415 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
USF1P22415 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC4.86□□□□□ -1.63
USF1P22415 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC4.86□□□□□ -1.63
USF1P22415 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC4.86□□□□□ -1.63
USF1P22415 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.86□□□□□ -1.63
USF1P22415 AL021707.7-201ENST00000607991 416 ntBASIC4.86□□□□□ -1.63
USF1P22415 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
USF1P22415 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.86□□□□□ -1.63
USF1P22415 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC4.86□□□□□ -1.63
USF1P22415 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.86□□□□□ -1.63
USF1P22415 AC004808.2-201ENST00000627965 773 ntBASIC4.86□□□□□ -1.63
USF1P22415 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.86□□□□□ -1.63
USF1P22415 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
USF1P22415 KYNUP3-201ENST00000574386 1341 ntBASIC4.86□□□□□ -1.63
USF1P22415 AC020633.1-201ENST00000468439 2247 ntBASIC4.86□□□□□ -1.63
USF1P22415 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
USF1P22415 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC4.86□□□□□ -1.63
USF1P22415 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
USF1P22415 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
USF1P22415 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
USF1P22415 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
USF1P22415 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC4.86□□□□□ -1.63
USF1P22415 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
USF1P22415 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC4.86□□□□□ -1.63
USF1P22415 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
USF1P22415 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC4.85□□□□□ -1.63
USF1P22415 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
USF1P22415 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC4.85□□□□□ -1.63
USF1P22415 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
USF1P22415 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
USF1P22415 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
USF1P22415 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.85□□□□□ -1.63
USF1P22415 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC4.85□□□□□ -1.63
USF1P22415 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
USF1P22415 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC4.85□□□□□ -1.63
USF1P22415 RNU1-19P-201ENST00000363306 165 ntBASIC4.85□□□□□ -1.63
USF1P22415 FIGN-202ENST00000409634 746 ntTSL 5 BASIC4.85□□□□□ -1.63
USF1P22415 RNU4-34P-201ENST00000410431 124 ntBASIC4.85□□□□□ -1.63
USF1P22415 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.85□□□□□ -1.63
USF1P22415 CLUHP1-201ENST00000435012 1190 ntBASIC4.85□□□□□ -1.63
USF1P22415 RPS3AP38-201ENST00000435889 763 ntBASIC4.85□□□□□ -1.63
USF1P22415 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.85□□□□□ -1.63
USF1P22415 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC4.85□□□□□ -1.63
USF1P22415 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC4.85□□□□□ -1.63
USF1P22415 AL450996.1-201ENST00000445574 1202 ntBASIC4.85□□□□□ -1.63
USF1P22415 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.85□□□□□ -1.63
USF1P22415 AL606490.1-201ENST00000452266 765 ntBASIC4.85□□□□□ -1.63
USF1P22415 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC4.85□□□□□ -1.63
USF1P22415 RN7SL610P-201ENST00000463845 291 ntBASIC4.85□□□□□ -1.63
USF1P22415 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
USF1P22415 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.85□□□□□ -1.63
USF1P22415 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC4.85□□□□□ -1.63
USF1P22415 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.85□□□□□ -1.63
USF1P22415 AC097486.1-201ENST00000515331 210 ntBASIC4.85□□□□□ -1.63
USF1P22415 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.85□□□□□ -1.63
USF1P22415 snoU109.5-201ENST00000516231 132 ntBASIC4.85□□□□□ -1.63
USF1P22415 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC4.85□□□□□ -1.63
USF1P22415 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
USF1P22415 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC4.85□□□□□ -1.63
USF1P22415 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.85□□□□□ -1.63
USF1P22415 AC244502.2-201ENST00000543361 851 ntBASIC4.85□□□□□ -1.63
USF1P22415 NPM1P42-201ENST00000560329 862 ntBASIC4.85□□□□□ -1.63
USF1P22415 RBM22P12-201ENST00000567098 1255 ntBASIC4.85□□□□□ -1.63
USF1P22415 MIR6730-201ENST00000622213 67 ntBASIC4.85□□□□□ -1.63
USF1P22415 OR11H2-202ENST00000641517 1085 ntBASIC4.85□□□□□ -1.63
USF1P22415 SAMM50P1-201ENST00000455403 1399 ntBASIC4.85□□□□□ -1.63
USF1P22415 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
USF1P22415 YES1P1-201ENST00000418510 1628 ntBASIC4.85□□□□□ -1.63
USF1P22415 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC4.85□□□□□ -1.63
USF1P22415 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.85□□□□□ -1.63
USF1P22415 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
USF1P22415 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
USF1P22415 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
USF1P22415 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
USF1P22415 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC4.85□□□□□ -1.63
USF1P22415 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
USF1P22415 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC4.85□□□□□ -1.63
USF1P22415 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC4.85□□□□□ -1.63
USF1P22415 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
USF1P22415 GVINP1-202ENST00000531871 7271 ntBASIC4.85□□□□□ -1.63
USF1P22415 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
USF1P22415 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
USF1P22415 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
USF1P22415 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
USF1P22415 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms