Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.76□□□□□ -1.49
HLA-DPA1P20036 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.76□□□□□ -1.49
HLA-DPA1P20036 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.76□□□□□ -1.49
HLA-DPA1P20036 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.76□□□□□ -1.49
HLA-DPA1P20036 AC232271.1-201ENST00000602455 2715 ntBASIC5.76□□□□□ -1.49
HLA-DPA1P20036 AC133552.1-201ENST00000569988 4007 ntBASIC5.76□□□□□ -1.49
HLA-DPA1P20036 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HLA-DPA1P20036 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HLA-DPA1P20036 NEPNP-201ENST00000404786 1371 ntBASIC5.76□□□□□ -1.49
HLA-DPA1P20036 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HLA-DPA1P20036 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HLA-DPA1P20036 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
HLA-DPA1P20036 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HLA-DPA1P20036 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.76□□□□□ -1.49
HLA-DPA1P20036 BCORP1-203ENST00000513194 5093 ntBASIC5.76□□□□□ -1.49
HLA-DPA1P20036 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-DPA1P20036 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
HLA-DPA1P20036 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-DPA1P20036 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.75□□□□□ -1.49
HLA-DPA1P20036 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
HLA-DPA1P20036 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-DPA1P20036 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.75□□□□□ -1.49
HLA-DPA1P20036 MIR375-201ENST00000362103 64 ntBASIC5.75□□□□□ -1.49
HLA-DPA1P20036 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
HLA-DPA1P20036 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
HLA-DPA1P20036 AC245060.4-201ENST00000413293 1121 ntBASIC5.75□□□□□ -1.49
HLA-DPA1P20036 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.75□□□□□ -1.49
HLA-DPA1P20036 ARAFP1-201ENST00000422172 605 ntBASIC5.75□□□□□ -1.49
HLA-DPA1P20036 OR10T1P-201ENST00000424327 947 ntBASIC5.75□□□□□ -1.49
HLA-DPA1P20036 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-DPA1P20036 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-DPA1P20036 CR383656.1-201ENST00000484916 377 ntBASIC5.75□□□□□ -1.49
HLA-DPA1P20036 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.75□□□□□ -1.49
HLA-DPA1P20036 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.75□□□□□ -1.49
HLA-DPA1P20036 IGKV2-4-201ENST00000523070 340 ntBASIC5.75□□□□□ -1.49
HLA-DPA1P20036 AC079600.1-201ENST00000550326 297 ntBASIC5.75□□□□□ -1.49
HLA-DPA1P20036 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.75□□□□□ -1.49
HLA-DPA1P20036 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.75□□□□□ -1.49
HLA-DPA1P20036 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.75□□□□□ -1.49
HLA-DPA1P20036 AGGF1P7-201ENST00000562369 913 ntBASIC5.75□□□□□ -1.49
HLA-DPA1P20036 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.75□□□□□ -1.49
HLA-DPA1P20036 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.75□□□□□ -1.49
HLA-DPA1P20036 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.75□□□□□ -1.49
HLA-DPA1P20036 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.75□□□□□ -1.49
HLA-DPA1P20036 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.75□□□□□ -1.49
HLA-DPA1P20036 AC100767.2-201ENST00000604840 693 ntBASIC5.75□□□□□ -1.49
HLA-DPA1P20036 AC117490.2-201ENST00000610042 594 ntBASIC5.75□□□□□ -1.49
HLA-DPA1P20036 AC008833.1-201ENST00000611633 691 ntBASIC5.75□□□□□ -1.49
HLA-DPA1P20036 AL352984.2-202ENST00000613699 155 ntBASIC5.75□□□□□ -1.49
HLA-DPA1P20036 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.75□□□□□ -1.49
HLA-DPA1P20036 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-DPA1P20036 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-DPA1P20036 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-DPA1P20036 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
HLA-DPA1P20036 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
HLA-DPA1P20036 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.75□□□□□ -1.49
HLA-DPA1P20036 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-DPA1P20036 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-DPA1P20036 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-DPA1P20036 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-DPA1P20036 AC009962.1-201ENST00000567327 3813 ntBASIC5.75□□□□□ -1.49
HLA-DPA1P20036 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
HLA-DPA1P20036 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
HLA-DPA1P20036 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
HLA-DPA1P20036 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.74□□□□□ -1.49
HLA-DPA1P20036 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DPA1P20036 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DPA1P20036 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DPA1P20036 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
HLA-DPA1P20036 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.74□□□□□ -1.49
HLA-DPA1P20036 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.74□□□□□ -1.49
HLA-DPA1P20036 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
HLA-DPA1P20036 AC125336.1-201ENST00000508893 2827 ntBASIC5.74□□□□□ -1.49
HLA-DPA1P20036 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.74□□□□□ -1.49
HLA-DPA1P20036 OR52B3P-201ENST00000314715 928 ntBASIC5.74□□□□□ -1.49
HLA-DPA1P20036 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.74□□□□□ -1.49
HLA-DPA1P20036 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DPA1P20036 RNU1-146P-201ENST00000364015 165 ntBASIC5.74□□□□□ -1.49
HLA-DPA1P20036 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DPA1P20036 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
HLA-DPA1P20036 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.74□□□□□ -1.49
HLA-DPA1P20036 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.74□□□□□ -1.49
HLA-DPA1P20036 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.74□□□□□ -1.49
HLA-DPA1P20036 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.74□□□□□ -1.49
HLA-DPA1P20036 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.74□□□□□ -1.49
HLA-DPA1P20036 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.74□□□□□ -1.49
HLA-DPA1P20036 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.74□□□□□ -1.49
HLA-DPA1P20036 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.74□□□□□ -1.49
HLA-DPA1P20036 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.74□□□□□ -1.49
HLA-DPA1P20036 RPSAP37-201ENST00000470913 821 ntBASIC5.74□□□□□ -1.49
HLA-DPA1P20036 RPS3AP15-201ENST00000483874 781 ntBASIC5.74□□□□□ -1.49
HLA-DPA1P20036 GLUD1P3-202ENST00000508551 200 ntBASIC5.74□□□□□ -1.49
HLA-DPA1P20036 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.74□□□□□ -1.49
HLA-DPA1P20036 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.74□□□□□ -1.49
HLA-DPA1P20036 AC005000.1-201ENST00000536192 288 ntBASIC5.74□□□□□ -1.49
HLA-DPA1P20036 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.74□□□□□ -1.49
HLA-DPA1P20036 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.74□□□□□ -1.49
HLA-DPA1P20036 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.74□□□□□ -1.49
HLA-DPA1P20036 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.74□□□□□ -1.49
HLA-DPA1P20036 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms