Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AC002310.3-201ENST00000569728 723 ntBASIC4.58□□□□□ -1.68
CTSDP07339 AC090236.2-201ENST00000587933 1101 ntBASIC4.58□□□□□ -1.68
CTSDP07339 TEX41-218ENST00000596540 882 ntTSL 5 BASIC4.58□□□□□ -1.68
CTSDP07339 AC091167.5-201ENST00000605689 894 ntBASIC4.58□□□□□ -1.68
CTSDP07339 MIR7109-201ENST00000613748 65 ntBASIC4.58□□□□□ -1.68
CTSDP07339 AC245014.3-201ENST00000618589 347 ntBASIC4.58□□□□□ -1.68
CTSDP07339 AL591926.1-201ENST00000620542 217 ntBASIC4.58□□□□□ -1.68
CTSDP07339 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC4.58□□□□□ -1.68
CTSDP07339 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.58□□□□□ -1.68
CTSDP07339 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CTSDP07339 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC4.58□□□□□ -1.68
CTSDP07339 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CTSDP07339 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CTSDP07339 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
CTSDP07339 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CTSDP07339 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CTSDP07339 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CTSDP07339 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CTSDP07339 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC4.57□□□□□ -1.68
CTSDP07339 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CTSDP07339 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
CTSDP07339 Z95331.1-201ENST00000623075 23112 ntBASIC4.57□□□□□ -1.68
CTSDP07339 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CTSDP07339 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.57□□□□□ -1.68
CTSDP07339 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.57□□□□□ -1.68
CTSDP07339 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.57□□□□□ -1.68
CTSDP07339 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC4.57□□□□□ -1.68
CTSDP07339 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.57□□□□□ -1.68
CTSDP07339 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.57□□□□□ -1.68
CTSDP07339 AC007161.1-204ENST00000423039 460 ntBASIC4.57□□□□□ -1.68
CTSDP07339 PLA2G12AP2-201ENST00000424744 264 ntBASIC4.57□□□□□ -1.68
CTSDP07339 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC4.57□□□□□ -1.68
CTSDP07339 AC097463.1-201ENST00000447288 481 ntBASIC4.57□□□□□ -1.68
CTSDP07339 CFL1P4-201ENST00000451536 498 ntBASIC4.57□□□□□ -1.68
CTSDP07339 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.57□□□□□ -1.68
CTSDP07339 AC245028.2-201ENST00000458673 253 ntBASIC4.57□□□□□ -1.68
CTSDP07339 RN7SL168P-201ENST00000463821 279 ntBASIC4.57□□□□□ -1.68
CTSDP07339 AL122020.1-201ENST00000472287 459 ntBASIC4.57□□□□□ -1.68
CTSDP07339 RPS12P31-201ENST00000491419 398 ntBASIC4.57□□□□□ -1.68
CTSDP07339 AC009120.1-201ENST00000493458 473 ntBASIC4.57□□□□□ -1.68
CTSDP07339 RPS24P16-201ENST00000497294 392 ntBASIC4.57□□□□□ -1.68
CTSDP07339 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.57□□□□□ -1.68
CTSDP07339 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.57□□□□□ -1.68
CTSDP07339 Vault.2-201ENST00000516519 98 ntBASIC4.57□□□□□ -1.68
CTSDP07339 SCARNA6.1-201ENST00000516989 238 ntBASIC4.57□□□□□ -1.68
CTSDP07339 RN7SKP35-201ENST00000517210 151 ntBASIC4.57□□□□□ -1.68
CTSDP07339 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.57□□□□□ -1.68
CTSDP07339 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC4.57□□□□□ -1.68
CTSDP07339 IGLV3-30-201ENST00000524362 298 ntBASIC4.57□□□□□ -1.68
CTSDP07339 HSPE1P2-201ENST00000554777 306 ntBASIC4.57□□□□□ -1.68
CTSDP07339 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.57□□□□□ -1.68
CTSDP07339 AL356801.1-201ENST00000559320 294 ntBASIC4.57□□□□□ -1.68
CTSDP07339 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC4.57□□□□□ -1.68
CTSDP07339 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC4.57□□□□□ -1.68
CTSDP07339 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC4.57□□□□□ -1.68
CTSDP07339 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC4.57□□□□□ -1.68
CTSDP07339 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC4.57□□□□□ -1.68
CTSDP07339 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.57□□□□□ -1.68
CTSDP07339 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC4.57□□□□□ -1.68
CTSDP07339 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.57□□□□□ -1.68
CTSDP07339 AC004801.6-201ENST00000616571 978 ntBASIC4.57□□□□□ -1.68
CTSDP07339 AC073869.8-201ENST00000641806 335 ntBASIC4.57□□□□□ -1.68
CTSDP07339 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CTSDP07339 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC4.57□□□□□ -1.68
CTSDP07339 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CTSDP07339 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC4.57□□□□□ -1.68
CTSDP07339 AC003973.3-201ENST00000624863 2822 ntBASIC4.57□□□□□ -1.68
CTSDP07339 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.57□□□□□ -1.68
CTSDP07339 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CTSDP07339 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CTSDP07339 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CTSDP07339 PROS2P-201ENST00000474651 1951 ntBASIC4.56□□□□□ -1.68
CTSDP07339 AC104966.1-201ENST00000467010 1464 ntBASIC4.56□□□□□ -1.68
CTSDP07339 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CTSDP07339 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.56□□□□□ -1.68
CTSDP07339 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CTSDP07339 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
CTSDP07339 CASC19-248ENST00000641674 1356 ntBASIC4.56□□□□□ -1.68
CTSDP07339 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CTSDP07339 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.56□□□□□ -1.68
CTSDP07339 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CTSDP07339 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC4.56□□□□□ -1.68
CTSDP07339 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CTSDP07339 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CTSDP07339 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CTSDP07339 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
CTSDP07339 NACAP7-201ENST00000407371 609 ntBASIC4.56□□□□□ -1.68
CTSDP07339 RPL12P9-201ENST00000412942 488 ntBASIC4.56□□□□□ -1.68
CTSDP07339 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC4.56□□□□□ -1.68
CTSDP07339 AC126120.1-201ENST00000431082 470 ntBASIC4.56□□□□□ -1.68
CTSDP07339 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.56□□□□□ -1.68
CTSDP07339 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC4.56□□□□□ -1.68
CTSDP07339 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
CTSDP07339 RBMY2AP-201ENST00000445405 1157 ntBASIC4.56□□□□□ -1.68
CTSDP07339 AC012512.1-201ENST00000446594 718 ntBASIC4.56□□□□□ -1.68
CTSDP07339 RBMY2CP-201ENST00000448575 1157 ntBASIC4.56□□□□□ -1.68
CTSDP07339 RBMY2DP-202ENST00000448881 1157 ntBASIC4.56□□□□□ -1.68
CTSDP07339 RBMY2BP-202ENST00000451071 1156 ntBASIC4.56□□□□□ -1.68
CTSDP07339 RN7SL741P-201ENST00000482473 289 ntBASIC4.56□□□□□ -1.68
CTSDP07339 AC023424.1-201ENST00000496058 459 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms