Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HLA-DOAP06340 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
HLA-DOAP06340 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HLA-DOAP06340 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HLA-DOAP06340 AC123769.1-201ENST00000530992 3192 ntBASIC6.76□□□□□ -1.33
HLA-DOAP06340 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
HLA-DOAP06340 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
HLA-DOAP06340 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HLA-DOAP06340 RNU6-819P-201ENST00000364116 107 ntBASIC6.76□□□□□ -1.33
HLA-DOAP06340 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC6.76□□□□□ -1.33
HLA-DOAP06340 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
HLA-DOAP06340 RN7SKP59-201ENST00000410520 314 ntBASIC6.76□□□□□ -1.33
HLA-DOAP06340 OR13Z1P-201ENST00000416141 834 ntBASIC6.76□□□□□ -1.33
HLA-DOAP06340 NENFP1-201ENST00000419476 466 ntBASIC6.76□□□□□ -1.33
HLA-DOAP06340 OR5W1P-201ENST00000423705 938 ntBASIC6.76□□□□□ -1.33
HLA-DOAP06340 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.76□□□□□ -1.33
HLA-DOAP06340 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC6.76□□□□□ -1.33
HLA-DOAP06340 NDUFA5P1-201ENST00000433858 341 ntBASIC6.76□□□□□ -1.33
HLA-DOAP06340 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.76□□□□□ -1.33
HLA-DOAP06340 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.76□□□□□ -1.33
HLA-DOAP06340 MTCYBP11-201ENST00000447254 1109 ntBASIC6.76□□□□□ -1.33
HLA-DOAP06340 AC009963.4-201ENST00000448535 339 ntBASIC6.76□□□□□ -1.33
HLA-DOAP06340 AC098862.1-201ENST00000504991 413 ntBASIC6.76□□□□□ -1.33
HLA-DOAP06340 AC016550.1-201ENST00000505348 785 ntBASIC6.76□□□□□ -1.33
HLA-DOAP06340 IGLV2-28-201ENST00000520681 304 ntBASIC6.76□□□□□ -1.33
HLA-DOAP06340 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC6.76□□□□□ -1.33
HLA-DOAP06340 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.76□□□□□ -1.33
HLA-DOAP06340 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC6.76□□□□□ -1.33
HLA-DOAP06340 MRPS21P7-201ENST00000566937 238 ntBASIC6.76□□□□□ -1.33
HLA-DOAP06340 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.76□□□□□ -1.33
HLA-DOAP06340 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.76□□□□□ -1.33
HLA-DOAP06340 AC020915.5-201ENST00000596836 964 ntBASIC6.76□□□□□ -1.33
HLA-DOAP06340 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC6.76□□□□□ -1.33
HLA-DOAP06340 OR4H6P-202ENST00000603819 340 ntBASIC6.76□□□□□ -1.33
HLA-DOAP06340 AC097504.2-201ENST00000608088 454 ntBASIC6.76□□□□□ -1.33
HLA-DOAP06340 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC6.76□□□□□ -1.33
HLA-DOAP06340 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HLA-DOAP06340 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC6.76□□□□□ -1.33
HLA-DOAP06340 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HLA-DOAP06340 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
HLA-DOAP06340 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
HLA-DOAP06340 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
HLA-DOAP06340 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HLA-DOAP06340 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.76□□□□□ -1.33
HLA-DOAP06340 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HLA-DOAP06340 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.76□□□□□ -1.33
HLA-DOAP06340 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
HLA-DOAP06340 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HLA-DOAP06340 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.76□□□□□ -1.33
HLA-DOAP06340 AC005224.3-201ENST00000584683 2140 ntBASIC6.76□□□□□ -1.33
HLA-DOAP06340 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC6.76□□□□□ -1.33
HLA-DOAP06340 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.76□□□□□ -1.33
HLA-DOAP06340 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
HLA-DOAP06340 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HLA-DOAP06340 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC6.76□□□□□ -1.33
HLA-DOAP06340 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
HLA-DOAP06340 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.75□□□□□ -1.33
HLA-DOAP06340 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HLA-DOAP06340 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HLA-DOAP06340 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.75□□□□□ -1.33
HLA-DOAP06340 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HLA-DOAP06340 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HLA-DOAP06340 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HLA-DOAP06340 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
HLA-DOAP06340 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HLA-DOAP06340 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HLA-DOAP06340 MIR130A-201ENST00000385274 89 ntBASIC6.75□□□□□ -1.33
HLA-DOAP06340 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC6.75□□□□□ -1.33
HLA-DOAP06340 AL355433.1-201ENST00000422804 300 ntBASIC6.75□□□□□ -1.33
HLA-DOAP06340 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.75□□□□□ -1.33
HLA-DOAP06340 CYCSP51-201ENST00000443545 318 ntBASIC6.75□□□□□ -1.33
HLA-DOAP06340 MYO5BP2-201ENST00000449815 1277 ntBASIC6.75□□□□□ -1.33
HLA-DOAP06340 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.75□□□□□ -1.33
HLA-DOAP06340 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HLA-DOAP06340 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.75□□□□□ -1.33
HLA-DOAP06340 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.75□□□□□ -1.33
HLA-DOAP06340 AC026348.1-201ENST00000462549 1053 ntBASIC6.75□□□□□ -1.33
HLA-DOAP06340 AC100832.1-201ENST00000471945 383 ntBASIC6.75□□□□□ -1.33
HLA-DOAP06340 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.75□□□□□ -1.33
HLA-DOAP06340 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.75□□□□□ -1.33
HLA-DOAP06340 AC034244.2-201ENST00000514668 858 ntBASIC6.75□□□□□ -1.33
HLA-DOAP06340 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC6.75□□□□□ -1.33
HLA-DOAP06340 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.75□□□□□ -1.33
HLA-DOAP06340 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.75□□□□□ -1.33
HLA-DOAP06340 AC130364.2-201ENST00000528639 604 ntBASIC6.75□□□□□ -1.33
HLA-DOAP06340 DPPA3P2-202ENST00000557188 1219 ntBASIC6.75□□□□□ -1.33
HLA-DOAP06340 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC6.75□□□□□ -1.33
HLA-DOAP06340 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HLA-DOAP06340 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC6.75□□□□□ -1.33
HLA-DOAP06340 PPATP2-201ENST00000605635 508 ntBASIC6.75□□□□□ -1.33
HLA-DOAP06340 AC007204.2-201ENST00000615022 616 ntBASIC6.75□□□□□ -1.33
HLA-DOAP06340 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.75□□□□□ -1.33
HLA-DOAP06340 AC069234.4-201ENST00000621276 412 ntBASIC6.75□□□□□ -1.33
HLA-DOAP06340 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC6.75□□□□□ -1.33
HLA-DOAP06340 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
HLA-DOAP06340 AC009039.2-201ENST00000624524 529 ntBASIC6.75□□□□□ -1.33
HLA-DOAP06340 AC006453.5-201ENST00000636451 619 ntBASIC6.75□□□□□ -1.33
HLA-DOAP06340 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
HLA-DOAP06340 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HLA-DOAP06340 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms