Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 NXF4-202ENST00000416098 1465 ntBASIC7.08□□□□□ -1.28
COL5A2P05997 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL5A2P05997 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL5A2P05997 AC005725.1-201ENST00000577346 2607 ntBASIC7.07□□□□□ -1.28
COL5A2P05997 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL5A2P05997 AC022164.1-201ENST00000568767 2673 ntBASIC7.07□□□□□ -1.28
COL5A2P05997 AC006206.1-201ENST00000544842 3387 ntBASIC7.07□□□□□ -1.28
COL5A2P05997 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC7.07□□□□□ -1.28
COL5A2P05997 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
COL5A2P05997 SNORA70H-201ENST00000383910 135 ntBASIC7.07□□□□□ -1.28
COL5A2P05997 SNORA70J-201ENST00000384182 135 ntBASIC7.07□□□□□ -1.28
COL5A2P05997 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC7.07□□□□□ -1.28
COL5A2P05997 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC7.07□□□□□ -1.28
COL5A2P05997 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC7.07□□□□□ -1.28
COL5A2P05997 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC7.07□□□□□ -1.28
COL5A2P05997 RPL34P20-201ENST00000442771 351 ntBASIC7.07□□□□□ -1.28
COL5A2P05997 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC7.07□□□□□ -1.28
COL5A2P05997 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC7.07□□□□□ -1.28
COL5A2P05997 AC092754.1-201ENST00000472975 479 ntBASIC7.07□□□□□ -1.28
COL5A2P05997 OR11H3P-201ENST00000554547 982 ntBASIC7.07□□□□□ -1.28
COL5A2P05997 RPL27-207ENST00000590864 569 ntTSL 2 BASIC7.07□□□□□ -1.28
COL5A2P05997 XIST-210ENST00000602863 775 ntTSL 3 BASIC7.07□□□□□ -1.28
COL5A2P05997 AC135068.5-201ENST00000624197 983 ntBASIC7.07□□□□□ -1.28
COL5A2P05997 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC7.07□□□□□ -1.28
COL5A2P05997 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL5A2P05997 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL5A2P05997 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL5A2P05997 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL5A2P05997 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
COL5A2P05997 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL5A2P05997 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
COL5A2P05997 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL5A2P05997 IARS-213ENST00000627121 4587 ntTSL 5 BASIC7.07□□□□□ -1.28
COL5A2P05997 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL5A2P05997 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
COL5A2P05997 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC7.06□□□□□ -1.28
COL5A2P05997 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL5A2P05997 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC7.06□□□□□ -1.28
COL5A2P05997 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC7.06□□□□□ -1.28
COL5A2P05997 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC7.06□□□□□ -1.28
COL5A2P05997 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
COL5A2P05997 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL5A2P05997 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC7.06□□□□□ -1.28
COL5A2P05997 GJA6P-201ENST00000415117 1042 ntBASIC7.06□□□□□ -1.28
COL5A2P05997 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC7.06□□□□□ -1.28
COL5A2P05997 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC7.06□□□□□ -1.28
COL5A2P05997 AC016712.1-201ENST00000431088 378 ntBASIC7.06□□□□□ -1.28
COL5A2P05997 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC7.06□□□□□ -1.28
COL5A2P05997 RPL17P2-201ENST00000491913 451 ntBASIC7.06□□□□□ -1.28
COL5A2P05997 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC7.06□□□□□ -1.28
COL5A2P05997 BTF3P13-201ENST00000513224 490 ntBASIC7.06□□□□□ -1.28
COL5A2P05997 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC7.06□□□□□ -1.28
COL5A2P05997 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC7.06□□□□□ -1.28
COL5A2P05997 AL512310.9-201ENST00000553311 948 ntBASIC7.06□□□□□ -1.28
COL5A2P05997 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
COL5A2P05997 AL161616.1-201ENST00000611867 286 ntBASIC7.06□□□□□ -1.28
COL5A2P05997 AL356752.1-201ENST00000615844 593 ntBASIC7.06□□□□□ -1.28
COL5A2P05997 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC7.06□□□□□ -1.28
COL5A2P05997 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC7.06□□□□□ -1.28
COL5A2P05997 EEF1A1P33-201ENST00000554413 1362 ntBASIC7.06□□□□□ -1.28
COL5A2P05997 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
COL5A2P05997 AC114774.1-201ENST00000507410 1770 ntBASIC7.06□□□□□ -1.28
COL5A2P05997 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL5A2P05997 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL5A2P05997 OR4F13P-202ENST00000560066 2054 ntBASIC7.06□□□□□ -1.28
COL5A2P05997 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL5A2P05997 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL5A2P05997 AC007996.1-201ENST00000620414 2821 ntBASIC7.06□□□□□ -1.28
COL5A2P05997 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
COL5A2P05997 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL5A2P05997 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL5A2P05997 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC7.05□□□□□ -1.28
COL5A2P05997 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL5A2P05997 RNA5SP455-201ENST00000365190 119 ntBASIC7.05□□□□□ -1.28
COL5A2P05997 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
COL5A2P05997 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL5A2P05997 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL5A2P05997 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC7.05□□□□□ -1.28
COL5A2P05997 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL5A2P05997 RIMKLBP2-201ENST00000424737 654 ntBASIC7.05□□□□□ -1.28
COL5A2P05997 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC7.05□□□□□ -1.28
COL5A2P05997 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC7.05□□□□□ -1.28
COL5A2P05997 AL606490.8-201ENST00000441624 319 ntBASIC7.05□□□□□ -1.28
COL5A2P05997 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC7.05□□□□□ -1.28
COL5A2P05997 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC7.05□□□□□ -1.28
COL5A2P05997 SLC25A51P1-201ENST00000468432 871 ntBASIC7.05□□□□□ -1.28
COL5A2P05997 AC021106.1-201ENST00000509020 1058 ntBASIC7.05□□□□□ -1.28
COL5A2P05997 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC7.05□□□□□ -1.28
COL5A2P05997 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL5A2P05997 AC122688.1-201ENST00000541494 223 ntBASIC7.05□□□□□ -1.28
COL5A2P05997 MIR4270-201ENST00000581799 70 ntBASIC7.05□□□□□ -1.28
COL5A2P05997 AC068790.7-201ENST00000602347 528 ntBASIC7.05□□□□□ -1.28
COL5A2P05997 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC7.05□□□□□ -1.28
COL5A2P05997 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL5A2P05997 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL5A2P05997 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL5A2P05997 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC7.05□□□□□ -1.28
COL5A2P05997 UGP2-232ENST00000640075 567 ntTSL 5 BASIC7.05□□□□□ -1.28
COL5A2P05997 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
COL5A2P05997 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms