Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.37□□□□□ -1.55
TNFP01375 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
TNFP01375 HSPD1P7-201ENST00000447985 1686 ntBASIC5.37□□□□□ -1.55
TNFP01375 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TNFP01375 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
TNFP01375 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
TNFP01375 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
TNFP01375 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.37□□□□□ -1.55
TNFP01375 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
TNFP01375 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TNFP01375 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
TNFP01375 MIR133B-201ENST00000362210 119 ntBASIC5.37□□□□□ -1.55
TNFP01375 SNORA70.9-201ENST00000384370 135 ntBASIC5.37□□□□□ -1.55
TNFP01375 AL133388.1-201ENST00000404509 287 ntBASIC5.37□□□□□ -1.55
TNFP01375 SRSF1P1-201ENST00000424058 520 ntBASIC5.37□□□□□ -1.55
TNFP01375 RIMKLBP2-201ENST00000424737 654 ntBASIC5.37□□□□□ -1.55
TNFP01375 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.37□□□□□ -1.55
TNFP01375 GSTM5P1-201ENST00000434751 660 ntBASIC5.37□□□□□ -1.55
TNFP01375 CNOT7P2-201ENST00000441051 832 ntBASIC5.37□□□□□ -1.55
TNFP01375 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.37□□□□□ -1.55
TNFP01375 IGBP1P3-201ENST00000447449 1000 ntBASIC5.37□□□□□ -1.55
TNFP01375 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.37□□□□□ -1.55
TNFP01375 AL672138.1-201ENST00000450604 1015 ntBASIC5.37□□□□□ -1.55
TNFP01375 SNORD125-201ENST00000459538 96 ntBASIC5.37□□□□□ -1.55
TNFP01375 RN7SL515P-201ENST00000463999 297 ntBASIC5.37□□□□□ -1.55
TNFP01375 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.37□□□□□ -1.55
TNFP01375 AC072052.1-201ENST00000496556 306 ntBASIC5.37□□□□□ -1.55
TNFP01375 AC122688.1-201ENST00000541494 223 ntBASIC5.37□□□□□ -1.55
TNFP01375 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.37□□□□□ -1.55
TNFP01375 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TNFP01375 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.37□□□□□ -1.55
TNFP01375 AL352984.2-202ENST00000613699 155 ntBASIC5.37□□□□□ -1.55
TNFP01375 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.37□□□□□ -1.55
TNFP01375 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TNFP01375 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.37□□□□□ -1.55
TNFP01375 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.37□□□□□ -1.55
TNFP01375 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.37□□□□□ -1.55
TNFP01375 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TNFP01375 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.37□□□□□ -1.55
TNFP01375 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TNFP01375 MRRFP1-201ENST00000435941 1675 ntBASIC5.37□□□□□ -1.55
TNFP01375 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.37□□□□□ -1.55
TNFP01375 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
TNFP01375 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
TNFP01375 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.37□□□□□ -1.55
TNFP01375 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
TNFP01375 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TNFP01375 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
TNFP01375 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TNFP01375 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TNFP01375 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TNFP01375 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TNFP01375 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
TNFP01375 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.36□□□□□ -1.55
TNFP01375 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
TNFP01375 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
TNFP01375 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TNFP01375 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TNFP01375 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
TNFP01375 SNORA16A-201ENST00000384342 137 ntBASIC5.36□□□□□ -1.55
TNFP01375 SNORA67-201ENST00000384423 137 ntBASIC5.36□□□□□ -1.55
TNFP01375 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TNFP01375 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.36□□□□□ -1.55
TNFP01375 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.36□□□□□ -1.55
TNFP01375 PRUNEP1-201ENST00000425846 705 ntBASIC5.36□□□□□ -1.55
TNFP01375 AC092651.1-201ENST00000426110 312 ntBASIC5.36□□□□□ -1.55
TNFP01375 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.36□□□□□ -1.55
TNFP01375 RPL12P17-201ENST00000432393 498 ntBASIC5.36□□□□□ -1.55
TNFP01375 OR52B5P-201ENST00000435337 951 ntBASIC5.36□□□□□ -1.55
TNFP01375 AURKAPS1-201ENST00000451805 1212 ntBASIC5.36□□□□□ -1.55
TNFP01375 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.36□□□□□ -1.55
TNFP01375 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
TNFP01375 AC093763.2-201ENST00000505334 1223 ntBASIC5.36□□□□□ -1.55
TNFP01375 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.36□□□□□ -1.55
TNFP01375 GAPDHP62-201ENST00000515313 990 ntBASIC5.36□□□□□ -1.55
TNFP01375 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.36□□□□□ -1.55
TNFP01375 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.36□□□□□ -1.55
TNFP01375 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.36□□□□□ -1.55
TNFP01375 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.36□□□□□ -1.55
TNFP01375 AL121612.2-201ENST00000612261 482 ntBASIC5.36□□□□□ -1.55
TNFP01375 AL138960.1-201ENST00000613838 513 ntBASIC5.36□□□□□ -1.55
TNFP01375 AC069542.2-201ENST00000624816 216 ntBASIC5.36□□□□□ -1.55
TNFP01375 OR52B5P-202ENST00000641118 1110 ntBASIC5.36□□□□□ -1.55
TNFP01375 AC109780.1-201ENST00000451768 1344 ntBASIC5.36□□□□□ -1.55
TNFP01375 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TNFP01375 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.36□□□□□ -1.55
TNFP01375 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TNFP01375 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TNFP01375 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TNFP01375 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TNFP01375 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
TNFP01375 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.35□□□□□ -1.55
TNFP01375 OFD1P17-201ENST00000437639 3018 ntBASIC5.35□□□□□ -1.55
TNFP01375 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC5.35□□□□□ -1.55
TNFP01375 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TNFP01375 ZNF733P-202ENST00000444809 1573 ntBASIC5.35□□□□□ -1.55
TNFP01375 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TNFP01375 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TNFP01375 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.35□□□□□ -1.55
TNFP01375 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms