Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN9O95484 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN9O95484 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN9O95484 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN9O95484 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
CLDN9O95484 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.35□□□□□ -1.55
CLDN9O95484 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.35□□□□□ -1.55
CLDN9O95484 SNORD56.6-201ENST00000384569 71 ntBASIC5.35□□□□□ -1.55
CLDN9O95484 MIR551A-201ENST00000385042 96 ntBASIC5.35□□□□□ -1.55
CLDN9O95484 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN9O95484 AC244033.1-201ENST00000426826 870 ntBASIC5.35□□□□□ -1.55
CLDN9O95484 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.35□□□□□ -1.55
CLDN9O95484 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN9O95484 AC005297.1-201ENST00000444765 862 ntBASIC5.35□□□□□ -1.55
CLDN9O95484 LRRC37A14P-201ENST00000452297 462 ntBASIC5.35□□□□□ -1.55
CLDN9O95484 AL445665.1-202ENST00000452436 324 ntBASIC5.35□□□□□ -1.55
CLDN9O95484 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN9O95484 AC108751.3-201ENST00000461814 1020 ntBASIC5.35□□□□□ -1.55
CLDN9O95484 RN7SL583P-201ENST00000475692 287 ntBASIC5.35□□□□□ -1.55
CLDN9O95484 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN9O95484 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.35□□□□□ -1.55
CLDN9O95484 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.35□□□□□ -1.55
CLDN9O95484 AC021106.1-201ENST00000509020 1058 ntBASIC5.35□□□□□ -1.55
CLDN9O95484 AC091912.1-201ENST00000511351 248 ntBASIC5.35□□□□□ -1.55
CLDN9O95484 SEPT10P1-201ENST00000517342 1162 ntBASIC5.35□□□□□ -1.55
CLDN9O95484 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.35□□□□□ -1.55
CLDN9O95484 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC5.35□□□□□ -1.55
CLDN9O95484 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.35□□□□□ -1.55
CLDN9O95484 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.35□□□□□ -1.55
CLDN9O95484 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.35□□□□□ -1.55
CLDN9O95484 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.35□□□□□ -1.55
CLDN9O95484 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.35□□□□□ -1.55
CLDN9O95484 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.35□□□□□ -1.55
CLDN9O95484 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.35□□□□□ -1.55
CLDN9O95484 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.35□□□□□ -1.55
CLDN9O95484 AC009237.13-201ENST00000603193 276 ntBASIC5.35□□□□□ -1.55
CLDN9O95484 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.35□□□□□ -1.55
CLDN9O95484 AL162574.1-201ENST00000615702 950 ntBASIC5.35□□□□□ -1.55
CLDN9O95484 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CLDN9O95484 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.35□□□□□ -1.55
CLDN9O95484 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.35□□□□□ -1.55
CLDN9O95484 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN9O95484 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN9O95484 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN9O95484 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CLDN9O95484 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN9O95484 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN9O95484 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CLDN9O95484 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLDN9O95484 LINC01963-201ENST00000562038 3148 ntBASIC5.34□□□□□ -1.55
CLDN9O95484 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.34□□□□□ -1.55
CLDN9O95484 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.34□□□□□ -1.55
CLDN9O95484 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLDN9O95484 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLDN9O95484 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.34□□□□□ -1.55
CLDN9O95484 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLDN9O95484 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLDN9O95484 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLDN9O95484 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLDN9O95484 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.34□□□□□ -1.55
CLDN9O95484 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLDN9O95484 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLDN9O95484 AC023490.2-201ENST00000359859 470 ntBASIC5.34□□□□□ -1.55
CLDN9O95484 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CLDN9O95484 ADAM24P-201ENST00000398655 2101 ntBASIC5.34□□□□□ -1.55
CLDN9O95484 LYPLA1P3-201ENST00000402650 695 ntBASIC5.34□□□□□ -1.55
CLDN9O95484 AC016769.2-201ENST00000414815 475 ntBASIC5.34□□□□□ -1.55
CLDN9O95484 AC009506.2-201ENST00000420635 840 ntBASIC5.34□□□□□ -1.55
CLDN9O95484 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.34□□□□□ -1.55
CLDN9O95484 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.34□□□□□ -1.55
CLDN9O95484 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLDN9O95484 AL450996.1-201ENST00000445574 1202 ntBASIC5.34□□□□□ -1.55
CLDN9O95484 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
CLDN9O95484 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.34□□□□□ -1.55
CLDN9O95484 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.34□□□□□ -1.55
CLDN9O95484 AP000547.1-201ENST00000454360 617 ntBASIC5.34□□□□□ -1.55
CLDN9O95484 AC018638.3-201ENST00000461273 132 ntBASIC5.34□□□□□ -1.55
CLDN9O95484 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.34□□□□□ -1.55
CLDN9O95484 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.34□□□□□ -1.55
CLDN9O95484 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.34□□□□□ -1.55
CLDN9O95484 SNORA43.3-201ENST00000517240 103 ntBASIC5.34□□□□□ -1.55
CLDN9O95484 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.34□□□□□ -1.55
CLDN9O95484 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.34□□□□□ -1.55
CLDN9O95484 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.34□□□□□ -1.55
CLDN9O95484 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.34□□□□□ -1.55
CLDN9O95484 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.34□□□□□ -1.55
CLDN9O95484 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.34□□□□□ -1.55
CLDN9O95484 AC010632.3-201ENST00000611377 369 ntBASIC5.34□□□□□ -1.55
CLDN9O95484 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.34□□□□□ -1.55
CLDN9O95484 AL096712.1-201ENST00000614561 159 ntBASIC5.34□□□□□ -1.55
CLDN9O95484 AC125336.1-201ENST00000508893 2827 ntBASIC5.34□□□□□ -1.55
CLDN9O95484 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CLDN9O95484 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLDN9O95484 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLDN9O95484 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLDN9O95484 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
CLDN9O95484 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
CLDN9O95484 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CLDN9O95484 AC093671.1-201ENST00000624981 2929 ntBASIC5.34□□□□□ -1.56
CLDN9O95484 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.34□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms