Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
NKX2-2O95096 AC140479.2-201ENST00000421567 3130 ntBASIC5.39□□□□□ -1.55
NKX2-2O95096 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NKX2-2O95096 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
NKX2-2O95096 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
NKX2-2O95096 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NKX2-2O95096 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
NKX2-2O95096 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
NKX2-2O95096 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
NKX2-2O95096 AC007159.1-201ENST00000566529 4706 ntBASIC5.39□□□□□ -1.55
NKX2-2O95096 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NKX2-2O95096 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.39□□□□□ -1.55
NKX2-2O95096 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.39□□□□□ -1.55
NKX2-2O95096 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.39□□□□□ -1.55
NKX2-2O95096 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.39□□□□□ -1.55
NKX2-2O95096 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NKX2-2O95096 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
NKX2-2O95096 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.39□□□□□ -1.55
NKX2-2O95096 RNA5SP500-201ENST00000364486 119 ntBASIC5.39□□□□□ -1.55
NKX2-2O95096 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.39□□□□□ -1.55
NKX2-2O95096 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.39□□□□□ -1.55
NKX2-2O95096 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.39□□□□□ -1.55
NKX2-2O95096 RNU6-31P-201ENST00000384388 108 ntBASIC5.39□□□□□ -1.55
NKX2-2O95096 RPL11P3-201ENST00000395256 523 ntBASIC5.39□□□□□ -1.55
NKX2-2O95096 RN7SKP29-201ENST00000410957 272 ntBASIC5.39□□□□□ -1.55
NKX2-2O95096 RPL26P37-201ENST00000411983 438 ntBASIC5.39□□□□□ -1.55
NKX2-2O95096 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.39□□□□□ -1.55
NKX2-2O95096 ARL2BPP3-201ENST00000421226 480 ntBASIC5.39□□□□□ -1.55
NKX2-2O95096 VN1R21P-201ENST00000426703 765 ntBASIC5.39□□□□□ -1.55
NKX2-2O95096 AC110602.1-201ENST00000437414 318 ntBASIC5.39□□□□□ -1.55
NKX2-2O95096 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.39□□□□□ -1.55
NKX2-2O95096 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.39□□□□□ -1.55
NKX2-2O95096 AC104629.1-201ENST00000494226 508 ntBASIC5.39□□□□□ -1.55
NKX2-2O95096 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC5.39□□□□□ -1.55
NKX2-2O95096 AC105384.2-201ENST00000508433 640 ntBASIC5.39□□□□□ -1.55
NKX2-2O95096 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.39□□□□□ -1.55
NKX2-2O95096 OR5H7P-201ENST00000514084 930 ntBASIC5.39□□□□□ -1.55
NKX2-2O95096 Y_RNA.667-201ENST00000516212 107 ntBASIC5.39□□□□□ -1.55
NKX2-2O95096 RNA5SP438-201ENST00000516561 112 ntBASIC5.39□□□□□ -1.55
NKX2-2O95096 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.39□□□□□ -1.55
NKX2-2O95096 AC019227.1-201ENST00000526902 510 ntBASIC5.39□□□□□ -1.55
NKX2-2O95096 AP000648.1-201ENST00000529682 397 ntBASIC5.39□□□□□ -1.55
NKX2-2O95096 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.39□□□□□ -1.55
NKX2-2O95096 SNX6P1-201ENST00000601728 1224 ntBASIC5.39□□□□□ -1.55
NKX2-2O95096 AL031601.1-201ENST00000605702 394 ntBASIC5.39□□□□□ -1.55
NKX2-2O95096 NANOGP3-201ENST00000605855 286 ntBASIC5.39□□□□□ -1.55
NKX2-2O95096 AC245389.2-201ENST00000616023 576 ntBASIC5.39□□□□□ -1.55
NKX2-2O95096 AC242843.1-201ENST00000618702 573 ntBASIC5.39□□□□□ -1.55
NKX2-2O95096 AC106858.1-201ENST00000637497 429 ntBASIC5.39□□□□□ -1.55
NKX2-2O95096 HSPD1P7-201ENST00000447985 1686 ntBASIC5.39□□□□□ -1.55
NKX2-2O95096 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NKX2-2O95096 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NKX2-2O95096 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.39□□□□□ -1.55
NKX2-2O95096 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NKX2-2O95096 AL359715.3-201ENST00000569267 2123 ntBASIC5.39□□□□□ -1.55
NKX2-2O95096 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NKX2-2O95096 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NKX2-2O95096 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NKX2-2O95096 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NKX2-2O95096 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.39□□□□□ -1.55
NKX2-2O95096 AP004607.3-201ENST00000530354 3915 ntBASIC5.39□□□□□ -1.55
NKX2-2O95096 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.39□□□□□ -1.55
NKX2-2O95096 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
NKX2-2O95096 AC133552.1-201ENST00000569988 4007 ntBASIC5.39□□□□□ -1.55
NKX2-2O95096 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
NKX2-2O95096 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NKX2-2O95096 AC018628.1-201ENST00000624147 3819 ntBASIC5.38□□□□□ -1.55
NKX2-2O95096 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NKX2-2O95096 MFSD8-219ENST00000641228 2559 ntBASIC5.38□□□□□ -1.55
NKX2-2O95096 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
NKX2-2O95096 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.38□□□□□ -1.55
NKX2-2O95096 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NKX2-2O95096 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
NKX2-2O95096 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
NKX2-2O95096 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
NKX2-2O95096 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NKX2-2O95096 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NKX2-2O95096 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
NKX2-2O95096 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
NKX2-2O95096 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NKX2-2O95096 RNU1-150P-201ENST00000362491 162 ntBASIC5.38□□□□□ -1.55
NKX2-2O95096 RNA5SP433-201ENST00000364491 114 ntBASIC5.38□□□□□ -1.55
NKX2-2O95096 RN7SKP275-201ENST00000364626 301 ntBASIC5.38□□□□□ -1.55
NKX2-2O95096 RNU6-1263P-201ENST00000384601 106 ntBASIC5.38□□□□□ -1.55
NKX2-2O95096 GTF3AP1-201ENST00000416942 1004 ntBASIC5.38□□□□□ -1.55
NKX2-2O95096 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
NKX2-2O95096 HMGB3P10-201ENST00000434734 572 ntBASIC5.38□□□□□ -1.55
NKX2-2O95096 SCAND3P1-201ENST00000439854 1060 ntBASIC5.38□□□□□ -1.55
NKX2-2O95096 AL353898.1-201ENST00000444055 238 ntBASIC5.38□□□□□ -1.55
NKX2-2O95096 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.38□□□□□ -1.55
NKX2-2O95096 AL161722.1-201ENST00000446972 1032 ntBASIC5.38□□□□□ -1.55
NKX2-2O95096 AL157827.1-201ENST00000447622 132 ntBASIC5.38□□□□□ -1.55
NKX2-2O95096 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.38□□□□□ -1.55
NKX2-2O95096 RPL12P39-201ENST00000455456 496 ntBASIC5.38□□□□□ -1.55
NKX2-2O95096 AC093166.4-201ENST00000457867 318 ntBASIC5.38□□□□□ -1.55
NKX2-2O95096 RPL5P13-201ENST00000462840 709 ntBASIC5.38□□□□□ -1.55
NKX2-2O95096 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
NKX2-2O95096 AC093763.2-201ENST00000505334 1223 ntBASIC5.38□□□□□ -1.55
NKX2-2O95096 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.38□□□□□ -1.55
NKX2-2O95096 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms