Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC9.43□□□□□ -0.9
CUX2O14529 AL359265.2-201ENST00000434367 631 ntBASIC9.43□□□□□ -0.9
CUX2O14529 RPL36AP15-201ENST00000444514 266 ntBASIC9.43□□□□□ -0.9
CUX2O14529 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC9.43□□□□□ -0.9
CUX2O14529 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC9.43□□□□□ -0.9
CUX2O14529 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC9.43□□□□□ -0.9
CUX2O14529 AC093720.1-201ENST00000505681 714 ntBASIC9.43□□□□□ -0.9
CUX2O14529 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC9.43□□□□□ -0.9
CUX2O14529 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC9.43□□□□□ -0.9
CUX2O14529 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
CUX2O14529 AC091042.1-201ENST00000579213 173 ntBASIC9.43□□□□□ -0.9
CUX2O14529 AL391358.1-201ENST00000605342 190 ntBASIC9.43□□□□□ -0.9
CUX2O14529 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CUX2O14529 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC9.43□□□□□ -0.9
CUX2O14529 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC9.43□□□□□ -0.9
CUX2O14529 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CUX2O14529 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
CUX2O14529 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
CUX2O14529 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
CUX2O14529 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CUX2O14529 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
CUX2O14529 AC092070.2-203ENST00000598377 3644 ntBASIC9.43□□□□□ -0.9
CUX2O14529 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CUX2O14529 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
CUX2O14529 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
CUX2O14529 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC9.42□□□□□ -0.9
CUX2O14529 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC9.42□□□□□ -0.9
CUX2O14529 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
CUX2O14529 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
CUX2O14529 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CUX2O14529 SNORA37-201ENST00000384504 129 ntBASIC9.42□□□□□ -0.9
CUX2O14529 MIR551A-201ENST00000385042 96 ntBASIC9.42□□□□□ -0.9
CUX2O14529 AL158073.1-201ENST00000426848 1104 ntBASIC9.42□□□□□ -0.9
CUX2O14529 AL359073.1-201ENST00000448036 403 ntBASIC9.42□□□□□ -0.9
CUX2O14529 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC9.42□□□□□ -0.9
CUX2O14529 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC9.42□□□□□ -0.9
CUX2O14529 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC9.42□□□□□ -0.9
CUX2O14529 RPL7L1P3-201ENST00000455249 689 ntBASIC9.42□□□□□ -0.9
CUX2O14529 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC9.42□□□□□ -0.9
CUX2O14529 snoU13.1-201ENST00000459157 104 ntBASIC9.42□□□□□ -0.9
CUX2O14529 AC083829.1-201ENST00000503756 657 ntBASIC9.42□□□□□ -0.9
CUX2O14529 IGLV3-24-201ENST00000517477 197 ntBASIC9.42□□□□□ -0.9
CUX2O14529 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC9.42□□□□□ -0.9
CUX2O14529 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC9.42□□□□□ -0.9
CUX2O14529 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC9.42□□□□□ -0.9
CUX2O14529 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
CUX2O14529 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CUX2O14529 AL031123.3-201ENST00000623345 1837 ntBASIC9.42□□□□□ -0.9
CUX2O14529 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
CUX2O14529 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
CUX2O14529 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
CUX2O14529 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CUX2O14529 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
CUX2O14529 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC9.42□□□□□ -0.9
CUX2O14529 AL132640.2-201ENST00000559968 1698 ntBASIC9.42□□□□□ -0.9
CUX2O14529 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC9.42□□□□□ -0.9
CUX2O14529 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
CUX2O14529 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
CUX2O14529 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
CUX2O14529 RNA5SP251-201ENST00000410614 137 ntBASIC9.41□□□□□ -0.9
CUX2O14529 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC9.41□□□□□ -0.9
CUX2O14529 FTH1P25-201ENST00000447665 469 ntBASIC9.41□□□□□ -0.9
CUX2O14529 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC9.41□□□□□ -0.9
CUX2O14529 BGLT3-201ENST00000564523 994 ntBASIC9.41□□□□□ -0.9
CUX2O14529 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC9.41□□□□□ -0.9
CUX2O14529 PDCD6IPP1-202ENST00000622242 1064 ntBASIC9.41□□□□□ -0.9
CUX2O14529 AC004836.1-201ENST00000623032 634 ntBASIC9.41□□□□□ -0.9
CUX2O14529 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
CUX2O14529 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
CUX2O14529 CASC19-243ENST00000641588 1546 ntBASIC9.41□□□□□ -0.9
CUX2O14529 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CUX2O14529 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC9.41□□□□□ -0.9
CUX2O14529 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CUX2O14529 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
CUX2O14529 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
CUX2O14529 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC9.41□□□□□ -0.9
CUX2O14529 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC9.41□□□□□ -0.9
CUX2O14529 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
CUX2O14529 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
CUX2O14529 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
CUX2O14529 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
CUX2O14529 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
CUX2O14529 TMA16P2-201ENST00000413187 601 ntBASIC9.4□□□□□ -0.9
CUX2O14529 RPL5P25-201ENST00000441148 775 ntBASIC9.4□□□□□ -0.9
CUX2O14529 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC9.4□□□□□ -0.9
CUX2O14529 AC097484.1-201ENST00000471148 389 ntBASIC9.4□□□□□ -0.9
CUX2O14529 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC9.4□□□□□ -0.9
CUX2O14529 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC9.4□□□□□ -0.9
CUX2O14529 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC9.4□□□□□ -0.9
CUX2O14529 SCARNA9-201ENST00000530422 353 ntBASIC9.4□□□□□ -0.9
CUX2O14529 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC9.4□□□□□ -0.9
CUX2O14529 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
CUX2O14529 AC034229.5-201ENST00000624258 185 ntBASIC9.4□□□□□ -0.9
CUX2O14529 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC9.4□□□□□ -0.9
CUX2O14529 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
CUX2O14529 AL359195.2-201ENST00000623657 4412 ntBASIC9.4□□□□□ -0.9
CUX2O14529 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
CUX2O14529 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
CUX2O14529 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC9.4□□□□□ -0.9
CUX2O14529 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms