Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 RPL12P16-201ENST00000431098 498 ntBASIC6.1□□□□□ -1.43
TRIM38O00635 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC6.1□□□□□ -1.43
TRIM38O00635 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC6.1□□□□□ -1.43
TRIM38O00635 MTCYBP11-201ENST00000447254 1109 ntBASIC6.1□□□□□ -1.43
TRIM38O00635 AL157827.1-201ENST00000447622 132 ntBASIC6.1□□□□□ -1.43
TRIM38O00635 RPL31P15-201ENST00000449770 338 ntBASIC6.1□□□□□ -1.43
TRIM38O00635 AC002553.3-201ENST00000453002 341 ntBASIC6.1□□□□□ -1.43
TRIM38O00635 AC092691.2-201ENST00000461787 803 ntBASIC6.1□□□□□ -1.43
TRIM38O00635 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC6.1□□□□□ -1.43
TRIM38O00635 AC007998.1-201ENST00000474156 672 ntBASIC6.1□□□□□ -1.43
TRIM38O00635 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC6.1□□□□□ -1.43
TRIM38O00635 AC090058.1-201ENST00000498788 435 ntBASIC6.1□□□□□ -1.43
TRIM38O00635 MTCO2P9-201ENST00000503214 694 ntBASIC6.1□□□□□ -1.43
TRIM38O00635 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC6.1□□□□□ -1.43
TRIM38O00635 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC6.1□□□□□ -1.43
TRIM38O00635 Y_RNA.667-201ENST00000516212 107 ntBASIC6.1□□□□□ -1.43
TRIM38O00635 SCARNA21.2-201ENST00000516600 166 ntBASIC6.1□□□□□ -1.43
TRIM38O00635 AC026407.1-201ENST00000518369 204 ntBASIC6.1□□□□□ -1.43
TRIM38O00635 AC008429.4-201ENST00000521201 182 ntBASIC6.1□□□□□ -1.43
TRIM38O00635 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.1□□□□□ -1.43
TRIM38O00635 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.1□□□□□ -1.43
TRIM38O00635 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.1□□□□□ -1.43
TRIM38O00635 AC106785.3-201ENST00000564064 847 ntBASIC6.1□□□□□ -1.43
TRIM38O00635 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.1□□□□□ -1.43
TRIM38O00635 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC6.1□□□□□ -1.43
TRIM38O00635 AC021483.2-201ENST00000567415 758 ntBASIC6.1□□□□□ -1.43
TRIM38O00635 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.1□□□□□ -1.43
TRIM38O00635 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.1□□□□□ -1.43
TRIM38O00635 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.1□□□□□ -1.43
TRIM38O00635 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC6.1□□□□□ -1.43
TRIM38O00635 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.1□□□□□ -1.43
TRIM38O00635 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.1□□□□□ -1.43
TRIM38O00635 RPL23AP61-201ENST00000623642 466 ntBASIC6.1□□□□□ -1.43
TRIM38O00635 AC116667.2-201ENST00000641075 823 ntBASIC6.1□□□□□ -1.43
TRIM38O00635 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
TRIM38O00635 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM38O00635 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.1□□□□□ -1.43
TRIM38O00635 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM38O00635 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM38O00635 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM38O00635 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM38O00635 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.1□□□□□ -1.43
TRIM38O00635 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.1□□□□□ -1.43
TRIM38O00635 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM38O00635 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
TRIM38O00635 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM38O00635 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM38O00635 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
TRIM38O00635 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM38O00635 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM38O00635 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
TRIM38O00635 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM38O00635 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM38O00635 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
TRIM38O00635 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.09□□□□□ -1.43
TRIM38O00635 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.09□□□□□ -1.43
TRIM38O00635 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM38O00635 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM38O00635 AL136520.1-201ENST00000600311 1322 ntBASIC6.09□□□□□ -1.43
TRIM38O00635 RNU6-792P-201ENST00000363490 107 ntBASIC6.09□□□□□ -1.43
TRIM38O00635 GCNT6-201ENST00000379591 934 ntBASIC6.09□□□□□ -1.43
TRIM38O00635 RNU6-31P-201ENST00000384388 108 ntBASIC6.09□□□□□ -1.43
TRIM38O00635 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
TRIM38O00635 AC087752.1-201ENST00000391360 558 ntBASIC6.09□□□□□ -1.43
TRIM38O00635 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.09□□□□□ -1.43
TRIM38O00635 RN7SKP151-201ENST00000410230 316 ntBASIC6.09□□□□□ -1.43
TRIM38O00635 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
TRIM38O00635 MTND4P11-201ENST00000417020 1058 ntBASIC6.09□□□□□ -1.43
TRIM38O00635 AC015977.1-201ENST00000418887 292 ntBASIC6.09□□□□□ -1.43
TRIM38O00635 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.09□□□□□ -1.43
TRIM38O00635 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.09□□□□□ -1.43
TRIM38O00635 SETP9-201ENST00000423837 832 ntBASIC6.09□□□□□ -1.43
TRIM38O00635 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC6.09□□□□□ -1.43
TRIM38O00635 GAPDHP75-201ENST00000433910 943 ntBASIC6.09□□□□□ -1.43
TRIM38O00635 HMGB3P10-201ENST00000434734 572 ntBASIC6.09□□□□□ -1.43
TRIM38O00635 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.09□□□□□ -1.43
TRIM38O00635 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.09□□□□□ -1.43
TRIM38O00635 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.09□□□□□ -1.43
TRIM38O00635 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.09□□□□□ -1.43
TRIM38O00635 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.09□□□□□ -1.43
TRIM38O00635 NXT1P1-201ENST00000458481 316 ntBASIC6.09□□□□□ -1.43
TRIM38O00635 AC108751.3-201ENST00000461814 1020 ntBASIC6.09□□□□□ -1.43
TRIM38O00635 RN7SL214P-201ENST00000487317 265 ntBASIC6.09□□□□□ -1.43
TRIM38O00635 AC082651.2-201ENST00000496833 166 ntBASIC6.09□□□□□ -1.43
TRIM38O00635 SUMO1P1-201ENST00000497904 306 ntBASIC6.09□□□□□ -1.43
TRIM38O00635 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM38O00635 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.09□□□□□ -1.43
TRIM38O00635 AC106800.3-201ENST00000511389 308 ntBASIC6.09□□□□□ -1.43
TRIM38O00635 AC110760.3-202ENST00000515177 371 ntBASIC6.09□□□□□ -1.43
TRIM38O00635 RNA5SP438-201ENST00000516561 112 ntBASIC6.09□□□□□ -1.43
TRIM38O00635 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.09□□□□□ -1.43
TRIM38O00635 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.09□□□□□ -1.43
TRIM38O00635 AP003102.1-201ENST00000525638 661 ntBASIC6.09□□□□□ -1.43
TRIM38O00635 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC6.09□□□□□ -1.43
TRIM38O00635 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC6.09□□□□□ -1.43
TRIM38O00635 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.09□□□□□ -1.43
TRIM38O00635 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
TRIM38O00635 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC6.09□□□□□ -1.43
TRIM38O00635 AC093014.1-201ENST00000548926 724 ntBASIC6.09□□□□□ -1.43
TRIM38O00635 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms