Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC7.25□□□□□ -1.25
SOX1O00570 AC009784.1-201ENST00000426484 460 ntBASIC7.25□□□□□ -1.25
SOX1O00570 FCF1P3-201ENST00000496394 590 ntBASIC7.25□□□□□ -1.25
SOX1O00570 AC084024.2-201ENST00000503480 791 ntBASIC7.25□□□□□ -1.25
SOX1O00570 SNX18P24-201ENST00000505249 671 ntBASIC7.25□□□□□ -1.25
SOX1O00570 RNU6-678P-201ENST00000516832 109 ntBASIC7.25□□□□□ -1.25
SOX1O00570 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC7.25□□□□□ -1.25
SOX1O00570 AP001317.1-201ENST00000531194 960 ntBASIC7.25□□□□□ -1.25
SOX1O00570 AP004247.1-201ENST00000531556 1289 ntBASIC7.25□□□□□ -1.25
SOX1O00570 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC7.25□□□□□ -1.25
SOX1O00570 AC007954.1-201ENST00000554198 494 ntBASIC7.25□□□□□ -1.25
SOX1O00570 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC7.25□□□□□ -1.25
SOX1O00570 ZNF519P3-201ENST00000557158 1032 ntBASIC7.25□□□□□ -1.25
SOX1O00570 MIR4701-201ENST00000583094 63 ntBASIC7.25□□□□□ -1.25
SOX1O00570 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC7.25□□□□□ -1.25
SOX1O00570 AC245052.7-201ENST00000601161 359 ntBASIC7.25□□□□□ -1.25
SOX1O00570 AL645933.2-201ENST00000606743 1207 ntBASIC7.25□□□□□ -1.25
SOX1O00570 AC097505.1-201ENST00000610199 565 ntBASIC7.25□□□□□ -1.25
SOX1O00570 AC015922.4-201ENST00000612568 690 ntBASIC7.25□□□□□ -1.25
SOX1O00570 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC7.25□□□□□ -1.25
SOX1O00570 CASC19-264ENST00000641912 1184 ntBASIC7.25□□□□□ -1.25
SOX1O00570 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SOX1O00570 CACNB2-213ENST00000612134 3825 ntTSL 5 BASIC7.25□□□□□ -1.25
SOX1O00570 FCGR3A-201ENST00000367967 2086 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
SOX1O00570 Z83820.1-201ENST00000456978 1499 ntBASIC7.24□□□□□ -1.25
SOX1O00570 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
SOX1O00570 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SOX1O00570 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SOX1O00570 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
SOX1O00570 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
SOX1O00570 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
SOX1O00570 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC7.24□□□□□ -1.25
SOX1O00570 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SOX1O00570 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SOX1O00570 NAT10-205ENST00000531159 3436 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
SOX1O00570 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SOX1O00570 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC7.24□□□□□ -1.25
SOX1O00570 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
SOX1O00570 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
SOX1O00570 MIR130B-202ENST00000385018 82 ntBASIC7.24□□□□□ -1.25
SOX1O00570 DNAJA1P2-201ENST00000421360 1197 ntBASIC7.24□□□□□ -1.25
SOX1O00570 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC7.24□□□□□ -1.25
SOX1O00570 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC7.24□□□□□ -1.25
SOX1O00570 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SOX1O00570 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC7.24□□□□□ -1.25
SOX1O00570 USP9YP22-201ENST00000438971 294 ntBASIC7.24□□□□□ -1.25
SOX1O00570 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC7.24□□□□□ -1.25
SOX1O00570 RPL36AP39-201ENST00000445859 318 ntBASIC7.24□□□□□ -1.25
SOX1O00570 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC7.24□□□□□ -1.25
SOX1O00570 SEPT7P3-201ENST00000455017 621 ntBASIC7.24□□□□□ -1.25
SOX1O00570 LINC01706-201ENST00000455299 748 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SOX1O00570 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SOX1O00570 GAPDHP36-201ENST00000480688 918 ntBASIC7.24□□□□□ -1.25
SOX1O00570 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC7.24□□□□□ -1.25
SOX1O00570 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SOX1O00570 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC7.24□□□□□ -1.25
SOX1O00570 PRDX4P1-201ENST00000507189 574 ntBASIC7.24□□□□□ -1.25
SOX1O00570 GTF2F2P1-201ENST00000511083 675 ntBASIC7.24□□□□□ -1.25
SOX1O00570 AC109471.1-201ENST00000511631 612 ntBASIC7.24□□□□□ -1.25
SOX1O00570 HNRNPKP5-201ENST00000515300 253 ntBASIC7.24□□□□□ -1.25
SOX1O00570 FABP5P5-201ENST00000515537 406 ntBASIC7.24□□□□□ -1.25
SOX1O00570 IGLV2-28-201ENST00000520681 304 ntBASIC7.24□□□□□ -1.25
SOX1O00570 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC7.24□□□□□ -1.25
SOX1O00570 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC7.24□□□□□ -1.25
SOX1O00570 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC7.24□□□□□ -1.25
SOX1O00570 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC7.24□□□□□ -1.25
SOX1O00570 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC7.24□□□□□ -1.25
SOX1O00570 MT1B-202ENST00000562399 351 ntTSL 3 BASIC7.24□□□□□ -1.25
SOX1O00570 MRPS21P8-201ENST00000569196 235 ntBASIC7.24□□□□□ -1.25
SOX1O00570 AC011260.1-201ENST00000578420 472 ntBASIC7.24□□□□□ -1.25
SOX1O00570 MTND1P15-201ENST00000579262 949 ntBASIC7.24□□□□□ -1.25
SOX1O00570 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC7.24□□□□□ -1.25
SOX1O00570 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC7.24□□□□□ -1.25
SOX1O00570 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC7.24□□□□□ -1.25
SOX1O00570 AL035410.2-201ENST00000604963 864 ntBASIC7.24□□□□□ -1.25
SOX1O00570 NDUFA8P1-201ENST00000605525 367 ntBASIC7.24□□□□□ -1.25
SOX1O00570 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC7.24□□□□□ -1.25
SOX1O00570 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC7.24□□□□□ -1.25
SOX1O00570 AC079395.2-201ENST00000610982 737 ntBASIC7.24□□□□□ -1.25
SOX1O00570 AL592148.2-201ENST00000612210 372 ntBASIC7.24□□□□□ -1.25
SOX1O00570 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC7.24□□□□□ -1.25
SOX1O00570 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
SOX1O00570 RFX5-201ENST00000290524 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SOX1O00570 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SOX1O00570 GULP1-203ENST00000409609 1932 ntAPPRIS P3 TSL 2 BASIC7.24□□□□□ -1.25
SOX1O00570 HSPD1P7-201ENST00000447985 1686 ntBASIC7.24□□□□□ -1.25
SOX1O00570 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SOX1O00570 CORIN-202ENST00000502252 3112 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
SOX1O00570 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC7.24□□□□□ -1.25
SOX1O00570 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
SOX1O00570 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SOX1O00570 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC7.24□□□□□ -1.25
SOX1O00570 KNG1-202ENST00000287611 1720 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
SOX1O00570 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SOX1O00570 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC7.23□□□□□ -1.25
SOX1O00570 SLC37A3-202ENST00000340308 2955 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SOX1O00570 HSPD1P9-201ENST00000420325 1636 ntBASIC7.23□□□□□ -1.25
SOX1O00570 AC011447.6-201ENST00000623510 2598 ntBASIC7.23□□□□□ -1.25
SOX1O00570 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SOX1O00570 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms