Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 RPEP1-201ENST00000504507 658 ntBASIC6.33□□□□□ -1.4
FOXN3O00409 AC119751.4-201ENST00000507498 357 ntBASIC6.33□□□□□ -1.4
FOXN3O00409 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC6.33□□□□□ -1.4
FOXN3O00409 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.33□□□□□ -1.4
FOXN3O00409 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.33□□□□□ -1.4
FOXN3O00409 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC6.33□□□□□ -1.4
FOXN3O00409 AC090424.1-201ENST00000535243 736 ntBASIC6.33□□□□□ -1.4
FOXN3O00409 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.33□□□□□ -1.4
FOXN3O00409 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.33□□□□□ -1.4
FOXN3O00409 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
FOXN3O00409 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.33□□□□□ -1.4
FOXN3O00409 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.33□□□□□ -1.4
FOXN3O00409 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.33□□□□□ -1.4
FOXN3O00409 AC097504.2-201ENST00000608088 454 ntBASIC6.33□□□□□ -1.4
FOXN3O00409 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.33□□□□□ -1.4
FOXN3O00409 AC092266.1-201ENST00000610958 165 ntBASIC6.33□□□□□ -1.4
FOXN3O00409 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
FOXN3O00409 AC009269.6-201ENST00000621778 588 ntBASIC6.33□□□□□ -1.4
FOXN3O00409 AL138955.1-201ENST00000622881 1040 ntBASIC6.33□□□□□ -1.4
FOXN3O00409 AC090617.9-201ENST00000623751 147 ntBASIC6.33□□□□□ -1.4
FOXN3O00409 AL683826.1-201ENST00000624104 627 ntBASIC6.33□□□□□ -1.4
FOXN3O00409 AC010872.1-201ENST00000624225 675 ntBASIC6.33□□□□□ -1.4
FOXN3O00409 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.33□□□□□ -1.4
FOXN3O00409 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
FOXN3O00409 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
FOXN3O00409 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
FOXN3O00409 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
FOXN3O00409 MTND5P23-201ENST00000430812 1655 ntBASIC6.33□□□□□ -1.4
FOXN3O00409 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
FOXN3O00409 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
FOXN3O00409 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
FOXN3O00409 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
FOXN3O00409 AC010329.1-201ENST00000593903 8328 ntBASIC6.32□□□□□ -1.4
FOXN3O00409 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
FOXN3O00409 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
FOXN3O00409 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.32□□□□□ -1.4
FOXN3O00409 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
FOXN3O00409 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
FOXN3O00409 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
FOXN3O00409 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC6.32□□□□□ -1.4
FOXN3O00409 BTF3P9-201ENST00000418784 283 ntBASIC6.32□□□□□ -1.4
FOXN3O00409 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.32□□□□□ -1.4
FOXN3O00409 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC6.32□□□□□ -1.4
FOXN3O00409 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.32□□□□□ -1.4
FOXN3O00409 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.32□□□□□ -1.4
FOXN3O00409 BX119321.1-201ENST00000428912 797 ntBASIC6.32□□□□□ -1.4
FOXN3O00409 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
FOXN3O00409 AL138787.1-202ENST00000437804 898 ntBASIC6.32□□□□□ -1.4
FOXN3O00409 KRT8P51-201ENST00000438938 274 ntBASIC6.32□□□□□ -1.4
FOXN3O00409 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
FOXN3O00409 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC6.32□□□□□ -1.4
FOXN3O00409 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC6.32□□□□□ -1.4
FOXN3O00409 AC005077.1-201ENST00000449226 375 ntBASIC6.32□□□□□ -1.4
FOXN3O00409 RSU1P1-201ENST00000453416 441 ntBASIC6.32□□□□□ -1.4
FOXN3O00409 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.32□□□□□ -1.4
FOXN3O00409 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.32□□□□□ -1.4
FOXN3O00409 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
FOXN3O00409 AC092865.4-201ENST00000477936 615 ntBASIC6.32□□□□□ -1.4
FOXN3O00409 AC034244.2-201ENST00000514668 858 ntBASIC6.32□□□□□ -1.4
FOXN3O00409 RN7SKP183-201ENST00000517169 324 ntBASIC6.32□□□□□ -1.4
FOXN3O00409 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.32□□□□□ -1.4
FOXN3O00409 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC6.32□□□□□ -1.4
FOXN3O00409 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC6.32□□□□□ -1.4
FOXN3O00409 AL845552.1-201ENST00000556820 323 ntBASIC6.32□□□□□ -1.4
FOXN3O00409 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.32□□□□□ -1.4
FOXN3O00409 GARSP1-201ENST00000570895 719 ntBASIC6.32□□□□□ -1.4
FOXN3O00409 TXNP4-201ENST00000575018 310 ntBASIC6.32□□□□□ -1.4
FOXN3O00409 MIR3154-201ENST00000577829 84 ntBASIC6.32□□□□□ -1.4
FOXN3O00409 FAM106CP-201ENST00000582212 507 ntBASIC6.32□□□□□ -1.4
FOXN3O00409 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC6.32□□□□□ -1.4
FOXN3O00409 AC006116.7-201ENST00000590141 756 ntBASIC6.32□□□□□ -1.4
FOXN3O00409 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
FOXN3O00409 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.32□□□□□ -1.4
FOXN3O00409 AC145423.1-201ENST00000605712 336 ntBASIC6.32□□□□□ -1.4
FOXN3O00409 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.32□□□□□ -1.4
FOXN3O00409 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.32□□□□□ -1.4
FOXN3O00409 AL359091.2-201ENST00000609303 556 ntBASIC6.32□□□□□ -1.4
FOXN3O00409 MIR6889-201ENST00000613185 59 ntBASIC6.32□□□□□ -1.4
FOXN3O00409 AL445670.1-201ENST00000618889 801 ntBASIC6.32□□□□□ -1.4
FOXN3O00409 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.32□□□□□ -1.4
FOXN3O00409 CASC19-274ENST00000642018 970 ntBASIC6.32□□□□□ -1.4
FOXN3O00409 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
FOXN3O00409 AC104966.1-201ENST00000467010 1464 ntBASIC6.32□□□□□ -1.4
FOXN3O00409 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.32□□□□□ -1.4
FOXN3O00409 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.32□□□□□ -1.4
FOXN3O00409 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
FOXN3O00409 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
FOXN3O00409 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
FOXN3O00409 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
FOXN3O00409 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
FOXN3O00409 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
FOXN3O00409 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
FOXN3O00409 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
FOXN3O00409 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
FOXN3O00409 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
FOXN3O00409 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
FOXN3O00409 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
FOXN3O00409 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
FOXN3O00409 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
FOXN3O00409 RNA5SP105-201ENST00000391123 113 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms