Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AL589826.1-201ENST00000340697 249 ntBASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 MIR323A-201ENST00000362199 86 ntBASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 RNA5SP242-201ENST00000364171 118 ntBASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 AC083799.1-201ENST00000366451 910 ntBASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 RPS6P23-201ENST00000413224 722 ntBASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 NENFP1-201ENST00000419476 466 ntBASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 PPIAP20-201ENST00000449839 135 ntBASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 MEMO1P4-201ENST00000453590 386 ntBASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 RPS27AP2-201ENST00000457576 465 ntBASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 HESX1-202ENST00000473921 757 ntTSL 5 BASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 HSPE1P2-201ENST00000554777 306 ntBASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 AC022404.1-201ENST00000555320 273 ntBASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 AL049872.1-201ENST00000556323 322 ntBASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 SNORD95-201ENST00000579879 68 ntBASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 AC011445.2-201ENST00000599274 173 ntBASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 AC015849.6-201ENST00000605454 474 ntBASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 AC012467.1-201ENST00000607740 256 ntBASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 AC007620.3-201ENST00000608131 497 ntBASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 MIR6862-1-201ENST00000613016 70 ntBASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 MIR6862-2-201ENST00000614755 70 ntBASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 AC008115.3-201ENST00000614874 549 ntBASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 AL118508.4-201ENST00000624142 1176 ntBASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 AL355480.1-201ENST00000629041 99 ntBASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 YES1P1-201ENST00000418510 1628 ntBASIC6.1□□□□□ -1.43
SNX9Q9Y5X1 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 AC114786.1-201ENST00000512892 1415 ntBASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 RNA5SP30-201ENST00000365552 115 ntBASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 AC092642.1-201ENST00000392417 425 ntBASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 CBX1P3-201ENST00000413296 527 ntBASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 BMS1P17-202ENST00000416720 316 ntBASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 AC009506.2-201ENST00000420635 840 ntBASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 CHEK2P5-201ENST00000423877 246 ntBASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 AC113412.1-201ENST00000425840 504 ntBASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 BX119904.3-201ENST00000428194 957 ntBASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 RSL24D1P8-201ENST00000434442 492 ntBASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 MTND2P3-201ENST00000452458 470 ntBASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 RPL12P39-201ENST00000455456 496 ntBASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 AC023141.9-201ENST00000458734 412 ntBASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 RN7SL72P-201ENST00000460697 269 ntBASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 AC147055.1-201ENST00000509261 750 ntBASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 AC074087.1-201ENST00000512059 724 ntBASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 AP002981.1-201ENST00000517692 975 ntBASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 AC078878.1-201ENST00000539832 958 ntBASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 AC004477.3-201ENST00000614061 590 ntBASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 AL162574.2-201ENST00000614618 657 ntBASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 MIR6729-201ENST00000618194 65 ntBASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 MIR4302-201ENST00000638058 60 ntBASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SNX9Q9Y5X1 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
SNX9Q9Y5X1 AC010266.2-201ENST00000564741 3255 ntBASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SNX9Q9Y5X1 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms