Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC009963.3-201ENST00000458090 486 ntBASIC6.91□□□□□ -1.3
COL4A3BPQ9Y5P4 AL022319.1-201ENST00000458183 1167 ntBASIC6.91□□□□□ -1.3
COL4A3BPQ9Y5P4 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.91□□□□□ -1.3
COL4A3BPQ9Y5P4 IMPA1P1-201ENST00000510718 842 ntBASIC6.91□□□□□ -1.3
COL4A3BPQ9Y5P4 RN7SKP35-201ENST00000517210 151 ntBASIC6.91□□□□□ -1.3
COL4A3BPQ9Y5P4 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.91□□□□□ -1.3
COL4A3BPQ9Y5P4 NPM1P35-201ENST00000533043 868 ntBASIC6.91□□□□□ -1.3
COL4A3BPQ9Y5P4 AC010735.1-201ENST00000567305 1026 ntBASIC6.91□□□□□ -1.3
COL4A3BPQ9Y5P4 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC6.91□□□□□ -1.3
COL4A3BPQ9Y5P4 AC011374.2-201ENST00000607135 526 ntBASIC6.91□□□□□ -1.3
COL4A3BPQ9Y5P4 AL591167.1-201ENST00000607321 456 ntBASIC6.91□□□□□ -1.3
COL4A3BPQ9Y5P4 AP001437.1-201ENST00000608783 456 ntBASIC6.91□□□□□ -1.3
COL4A3BPQ9Y5P4 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.91□□□□□ -1.3
COL4A3BPQ9Y5P4 RN7SL261P-201ENST00000613441 282 ntBASIC6.91□□□□□ -1.3
COL4A3BPQ9Y5P4 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.91□□□□□ -1.3
COL4A3BPQ9Y5P4 MIR6778-201ENST00000617912 73 ntBASIC6.91□□□□□ -1.3
COL4A3BPQ9Y5P4 FAM27E2-201ENST00000619668 403 ntBASIC6.91□□□□□ -1.3
COL4A3BPQ9Y5P4 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC6.91□□□□□ -1.3
COL4A3BPQ9Y5P4 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC6.91□□□□□ -1.3
COL4A3BPQ9Y5P4 AC018659.2-201ENST00000624690 715 ntBASIC6.91□□□□□ -1.3
COL4A3BPQ9Y5P4 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC6.91□□□□□ -1.3
COL4A3BPQ9Y5P4 MIR1910-201ENST00000636955 80 ntBASIC6.91□□□□□ -1.3
COL4A3BPQ9Y5P4 AC073869.7-201ENST00000640874 297 ntBASIC6.91□□□□□ -1.3
COL4A3BPQ9Y5P4 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.91□□□□□ -1.3
COL4A3BPQ9Y5P4 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.91□□□□□ -1.3
COL4A3BPQ9Y5P4 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL4A3BPQ9Y5P4 AC096921.2-201ENST00000561507 1916 ntBASIC6.91□□□□□ -1.3
COL4A3BPQ9Y5P4 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL4A3BPQ9Y5P4 MTCO1P18-201ENST00000455518 1419 ntBASIC6.91□□□□□ -1.3
COL4A3BPQ9Y5P4 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.91□□□□□ -1.3
COL4A3BPQ9Y5P4 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
COL4A3BPQ9Y5P4 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
COL4A3BPQ9Y5P4 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL4A3BPQ9Y5P4 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
COL4A3BPQ9Y5P4 AC007996.1-201ENST00000620414 2821 ntBASIC6.91□□□□□ -1.3
COL4A3BPQ9Y5P4 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 AC093297.3-201ENST00000607056 2517 ntBASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 SNORA43.1-201ENST00000364863 140 ntBASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 SNORA77.2-201ENST00000408571 112 ntBASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 RMRPP5-201ENST00000411156 267 ntBASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 HYALP1-201ENST00000417674 1279 ntBASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 AC007562.1-201ENST00000421819 517 ntBASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 AC241520.1-201ENST00000422654 1099 ntBASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 PTP4A1P7-201ENST00000423476 514 ntBASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 AC023274.2-201ENST00000445264 521 ntBASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 AC097463.1-201ENST00000447288 481 ntBASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 AL133244.1-201ENST00000456007 258 ntBASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 AC008083.2-201ENST00000546707 476 ntBASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 AC090666.1-201ENST00000578241 445 ntBASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 AC245884.10-201ENST00000597355 337 ntBASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 AC079315.1-201ENST00000602952 623 ntBASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 AC026979.4-201ENST00000606555 645 ntBASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 AC007342.8-201ENST00000623278 678 ntBASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 AC126544.2-201ENST00000625174 749 ntBASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 AC003992.1-201ENST00000635364 557 ntBASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 AC006927.2-201ENST00000639256 389 ntBASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 CCNT2P1-201ENST00000423082 1315 ntBASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 EIF3EP1-201ENST00000433978 1316 ntBASIC6.9□□□□□ -1.3
COL4A3BPQ9Y5P4 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
COL4A3BPQ9Y5P4 HDAC1P2-201ENST00000453661 1398 ntBASIC6.9□□□□□ -1.31
COL4A3BPQ9Y5P4 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
COL4A3BPQ9Y5P4 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
COL4A3BPQ9Y5P4 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms