Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 AL356801.1-201ENST00000559320 294 ntBASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 AC084759.1-201ENST00000561168 290 ntBASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 AC234775.3-201ENST00000564612 656 ntBASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 AC002069.2-201ENST00000603580 883 ntBASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 AC087468.1-201ENST00000604365 630 ntBASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 AC007786.3-201ENST00000615154 596 ntBASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 STX3-208ENST00000641815 3236 ntBASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 PDZK1P1-202ENST00000425209 1350 ntBASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 RNA5SP273-201ENST00000362484 113 ntBASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 MRPL53P1-201ENST00000414323 319 ntBASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 OR10T1P-201ENST00000424327 947 ntBASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 VN1R21P-201ENST00000426703 765 ntBASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 AC126120.1-201ENST00000431082 470 ntBASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 NDUFS5P5-201ENST00000437256 321 ntBASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 AC110602.1-201ENST00000437414 318 ntBASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 RPS27AP18-201ENST00000515536 459 ntBASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 RNA5SP473-201ENST00000516402 125 ntBASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 RNA5SP438-201ENST00000516561 112 ntBASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 AC025423.2-201ENST00000537570 439 ntBASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 AC139697.1-201ENST00000548429 745 ntBASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 AL121839.1-201ENST00000556233 1185 ntBASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 MIR4675-201ENST00000577898 77 ntBASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 AC009237.13-201ENST00000603193 276 ntBASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 AL159169.2-201ENST00000610061 1269 ntBASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 MIR7109-201ENST00000613748 65 ntBASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 IFIT1P1-201ENST00000400497 1449 ntBASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
RHBDD3Q9Y3P4 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 MIPEPP2-201ENST00000422560 1819 ntBASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 RNA5SP477-201ENST00000362639 119 ntBASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 AC004386.1-201ENST00000393214 761 ntBASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 AL357752.1-201ENST00000412817 349 ntBASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 AC098592.2-201ENST00000413158 265 ntBASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 RPL5P25-201ENST00000441148 775 ntBASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 OR7E116P-201ENST00000448529 957 ntBASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 NPM1P19-201ENST00000450070 712 ntBASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 MEMO1P4-201ENST00000453590 386 ntBASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 SNORD125-201ENST00000459538 96 ntBASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 AP002884.1-201ENST00000479691 655 ntBASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 RPL7AP10-201ENST00000481016 791 ntBASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 RPS7P6-201ENST00000485777 579 ntBASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 AC025458.1-201ENST00000506046 166 ntBASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 Y_RNA.667-201ENST00000516212 107 ntBASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms