Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
SHANK2Q9UPX8 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SHANK2Q9UPX8 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC8.1□□□□□ -1.11
SHANK2Q9UPX8 RPL23AP18-201ENST00000416139 468 ntBASIC8.1□□□□□ -1.11
SHANK2Q9UPX8 EI24P4-201ENST00000423683 1078 ntBASIC8.1□□□□□ -1.11
SHANK2Q9UPX8 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC8.1□□□□□ -1.11
SHANK2Q9UPX8 TPT1P12-201ENST00000448968 492 ntBASIC8.1□□□□□ -1.11
SHANK2Q9UPX8 AC104634.1-201ENST00000452720 462 ntBASIC8.1□□□□□ -1.11
SHANK2Q9UPX8 Z92846.1-201ENST00000456203 268 ntBASIC8.1□□□□□ -1.11
SHANK2Q9UPX8 RN7SL817P-201ENST00000480777 288 ntBASIC8.1□□□□□ -1.11
SHANK2Q9UPX8 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC8.1□□□□□ -1.11
SHANK2Q9UPX8 AP001804.1-201ENST00000526868 919 ntBASIC8.1□□□□□ -1.11
SHANK2Q9UPX8 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC8.1□□□□□ -1.11
SHANK2Q9UPX8 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC8.1□□□□□ -1.11
SHANK2Q9UPX8 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC8.1□□□□□ -1.11
SHANK2Q9UPX8 XIST-210ENST00000602863 775 ntTSL 3 BASIC8.1□□□□□ -1.11
SHANK2Q9UPX8 AL023583.1-201ENST00000607518 1143 ntBASIC8.1□□□□□ -1.11
SHANK2Q9UPX8 AC245389.2-201ENST00000616023 576 ntBASIC8.1□□□□□ -1.11
SHANK2Q9UPX8 AC242843.1-201ENST00000618702 573 ntBASIC8.1□□□□□ -1.11
SHANK2Q9UPX8 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC8.1□□□□□ -1.11
SHANK2Q9UPX8 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
SHANK2Q9UPX8 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SHANK2Q9UPX8 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
SHANK2Q9UPX8 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
SHANK2Q9UPX8 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SHANK2Q9UPX8 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SHANK2Q9UPX8 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC8.1□□□□□ -1.11
SHANK2Q9UPX8 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SHANK2Q9UPX8 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
SHANK2Q9UPX8 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SHANK2Q9UPX8 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SHANK2Q9UPX8 AC126755.2-208ENST00000327792 462 ntBASIC8.09□□□□□ -1.11
SHANK2Q9UPX8 AC138969.1-213ENST00000331436 462 ntBASIC8.09□□□□□ -1.11
SHANK2Q9UPX8 GNG5P2-201ENST00000372054 207 ntBASIC8.09□□□□□ -1.11
SHANK2Q9UPX8 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC8.09□□□□□ -1.11
SHANK2Q9UPX8 COX6CP17-201ENST00000421389 185 ntBASIC8.09□□□□□ -1.11
SHANK2Q9UPX8 DDX39BP1-205ENST00000422507 192 ntBASIC8.09□□□□□ -1.11
SHANK2Q9UPX8 IGBP1P3-201ENST00000447449 1000 ntBASIC8.09□□□□□ -1.11
SHANK2Q9UPX8 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC8.09□□□□□ -1.11
SHANK2Q9UPX8 RN7SL188P-201ENST00000469842 285 ntBASIC8.09□□□□□ -1.11
SHANK2Q9UPX8 NDUFA5P9-201ENST00000472609 340 ntBASIC8.09□□□□□ -1.11
SHANK2Q9UPX8 RN7SL205P-201ENST00000490174 284 ntBASIC8.09□□□□□ -1.11
SHANK2Q9UPX8 AC109464.1-201ENST00000511091 819 ntBASIC8.09□□□□□ -1.11
SHANK2Q9UPX8 UBE2Q2P10-201ENST00000514854 900 ntBASIC8.09□□□□□ -1.11
SHANK2Q9UPX8 RN7SKP248-201ENST00000516278 305 ntBASIC8.09□□□□□ -1.11
SHANK2Q9UPX8 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC8.09□□□□□ -1.11
SHANK2Q9UPX8 RN7SL52P-201ENST00000584271 284 ntBASIC8.09□□□□□ -1.11
SHANK2Q9UPX8 AC011447.4-201ENST00000587562 111 ntBASIC8.09□□□□□ -1.11
SHANK2Q9UPX8 RN7SL722P-201ENST00000617780 284 ntBASIC8.09□□□□□ -1.11
SHANK2Q9UPX8 RN7SL565P-201ENST00000618246 284 ntBASIC8.09□□□□□ -1.11
SHANK2Q9UPX8 AC002090.1-201ENST00000625000 2138 ntBASIC8.09□□□□□ -1.11
SHANK2Q9UPX8 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC8.09□□□□□ -1.11
SHANK2Q9UPX8 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC8.09□□□□□ -1.11
SHANK2Q9UPX8 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SHANK2Q9UPX8 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SHANK2Q9UPX8 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SHANK2Q9UPX8 STK3-216ENST00000523601 3107 ntTSL 2 BASIC8.09□□□□□ -1.11
SHANK2Q9UPX8 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC8.09□□□□□ -1.12
SHANK2Q9UPX8 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC8.09□□□□□ -1.12
SHANK2Q9UPX8 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC8.09□□□□□ -1.12
SHANK2Q9UPX8 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
SHANK2Q9UPX8 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
SHANK2Q9UPX8 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
SHANK2Q9UPX8 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC8.08□□□□□ -1.12
SHANK2Q9UPX8 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC8.08□□□□□ -1.12
SHANK2Q9UPX8 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
SHANK2Q9UPX8 SNURFL-201ENST00000309296 343 ntBASIC8.08□□□□□ -1.12
SHANK2Q9UPX8 RNU1-43P-201ENST00000365052 165 ntBASIC8.08□□□□□ -1.12
SHANK2Q9UPX8 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SHANK2Q9UPX8 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC8.08□□□□□ -1.12
SHANK2Q9UPX8 AC093162.1-201ENST00000419682 124 ntBASIC8.08□□□□□ -1.12
SHANK2Q9UPX8 RPL7P56-201ENST00000429441 717 ntBASIC8.08□□□□□ -1.12
SHANK2Q9UPX8 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC8.08□□□□□ -1.12
SHANK2Q9UPX8 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
SHANK2Q9UPX8 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC8.08□□□□□ -1.12
SHANK2Q9UPX8 LINC02210-201ENST00000444561 288 ntBASIC8.08□□□□□ -1.12
SHANK2Q9UPX8 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC8.08□□□□□ -1.12
SHANK2Q9UPX8 HNRNPDLP2-201ENST00000455248 751 ntBASIC8.08□□□□□ -1.12
SHANK2Q9UPX8 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
SHANK2Q9UPX8 AC068587.1-201ENST00000483613 781 ntBASIC8.08□□□□□ -1.12
SHANK2Q9UPX8 YWHABP2-201ENST00000540201 713 ntBASIC8.08□□□□□ -1.12
SHANK2Q9UPX8 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC8.08□□□□□ -1.12
SHANK2Q9UPX8 AC209154.1-201ENST00000582156 337 ntBASIC8.08□□□□□ -1.12
SHANK2Q9UPX8 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC8.08□□□□□ -1.12
SHANK2Q9UPX8 CASC19-281ENST00000642118 1554 ntBASIC8.08□□□□□ -1.12
SHANK2Q9UPX8 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC8.08□□□□□ -1.12
SHANK2Q9UPX8 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC8.08□□□□□ -1.12
SHANK2Q9UPX8 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
SHANK2Q9UPX8 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
SHANK2Q9UPX8 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
SHANK2Q9UPX8 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC8.08□□□□□ -1.12
SHANK2Q9UPX8 UGT2B24P-201ENST00000514441 1597 ntBASIC8.08□□□□□ -1.12
SHANK2Q9UPX8 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC8.07□□□□□ -1.12
SHANK2Q9UPX8 RNU1-32P-201ENST00000363937 159 ntBASIC8.07□□□□□ -1.12
SHANK2Q9UPX8 RN7SKP126-201ENST00000411143 300 ntBASIC8.07□□□□□ -1.12
SHANK2Q9UPX8 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC8.07□□□□□ -1.12
SHANK2Q9UPX8 AL590139.1-201ENST00000416267 400 ntBASIC8.07□□□□□ -1.12
SHANK2Q9UPX8 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC8.07□□□□□ -1.12
SHANK2Q9UPX8 AL161722.1-201ENST00000446972 1032 ntBASIC8.07□□□□□ -1.12
SHANK2Q9UPX8 AC096741.1-201ENST00000472250 846 ntBASIC8.07□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms