Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CISHQ9NSE2 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.8□□□□□ -1.48
CISHQ9NSE2 AC006600.2-201ENST00000624834 2506 ntBASIC5.8□□□□□ -1.48
CISHQ9NSE2 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.8□□□□□ -1.48
CISHQ9NSE2 RN7SKP145-201ENST00000363291 303 ntBASIC5.8□□□□□ -1.48
CISHQ9NSE2 RN7SKP206-201ENST00000410823 293 ntBASIC5.8□□□□□ -1.48
CISHQ9NSE2 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.8□□□□□ -1.48
CISHQ9NSE2 PRUNEP1-201ENST00000425846 705 ntBASIC5.8□□□□□ -1.48
CISHQ9NSE2 NAP1L4P2-201ENST00000425958 899 ntBASIC5.8□□□□□ -1.48
CISHQ9NSE2 AL121776.1-201ENST00000429337 372 ntBASIC5.8□□□□□ -1.48
CISHQ9NSE2 GSTM5P1-201ENST00000434751 660 ntBASIC5.8□□□□□ -1.48
CISHQ9NSE2 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.8□□□□□ -1.48
CISHQ9NSE2 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.8□□□□□ -1.48
CISHQ9NSE2 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.8□□□□□ -1.48
CISHQ9NSE2 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.8□□□□□ -1.48
CISHQ9NSE2 AL035090.1-201ENST00000454835 332 ntBASIC5.8□□□□□ -1.48
CISHQ9NSE2 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CISHQ9NSE2 RN7SL184P-201ENST00000488308 297 ntBASIC5.8□□□□□ -1.48
CISHQ9NSE2 SCARNA20.4-201ENST00000516969 131 ntBASIC5.8□□□□□ -1.48
CISHQ9NSE2 SEPT10P1-201ENST00000517342 1162 ntBASIC5.8□□□□□ -1.48
CISHQ9NSE2 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.8□□□□□ -1.48
CISHQ9NSE2 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.8□□□□□ -1.48
CISHQ9NSE2 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.8□□□□□ -1.48
CISHQ9NSE2 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.8□□□□□ -1.48
CISHQ9NSE2 BLZF2P-201ENST00000553776 1130 ntBASIC5.8□□□□□ -1.48
CISHQ9NSE2 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.8□□□□□ -1.48
CISHQ9NSE2 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.8□□□□□ -1.48
CISHQ9NSE2 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.8□□□□□ -1.48
CISHQ9NSE2 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.8□□□□□ -1.48
CISHQ9NSE2 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CISHQ9NSE2 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.8□□□□□ -1.48
CISHQ9NSE2 AC007204.2-201ENST00000615022 616 ntBASIC5.8□□□□□ -1.48
CISHQ9NSE2 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CISHQ9NSE2 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CISHQ9NSE2 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CISHQ9NSE2 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CISHQ9NSE2 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.8□□□□□ -1.48
CISHQ9NSE2 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CISHQ9NSE2 AC003973.3-201ENST00000624863 2822 ntBASIC5.8□□□□□ -1.48
CISHQ9NSE2 AC004656.1-201ENST00000568479 4951 ntBASIC5.79□□□□□ -1.48
CISHQ9NSE2 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CISHQ9NSE2 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CISHQ9NSE2 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
CISHQ9NSE2 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CISHQ9NSE2 AC016745.2-201ENST00000608834 3443 ntBASIC5.79□□□□□ -1.48
CISHQ9NSE2 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CISHQ9NSE2 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CISHQ9NSE2 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CISHQ9NSE2 MIR133B-201ENST00000362210 119 ntBASIC5.79□□□□□ -1.48
CISHQ9NSE2 RNA5SP132-201ENST00000364725 118 ntBASIC5.79□□□□□ -1.48
CISHQ9NSE2 SNORA70.6-201ENST00000383934 134 ntBASIC5.79□□□□□ -1.48
CISHQ9NSE2 MIR143-201ENST00000385300 106 ntBASIC5.79□□□□□ -1.48
CISHQ9NSE2 U3.25-201ENST00000391209 220 ntBASIC5.79□□□□□ -1.48
CISHQ9NSE2 DBIP1-201ENST00000401435 260 ntBASIC5.79□□□□□ -1.48
CISHQ9NSE2 AL133388.1-201ENST00000404509 287 ntBASIC5.79□□□□□ -1.48
CISHQ9NSE2 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.79□□□□□ -1.48
CISHQ9NSE2 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.79□□□□□ -1.48
CISHQ9NSE2 MTND2P40-201ENST00000436718 841 ntBASIC5.79□□□□□ -1.48
CISHQ9NSE2 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.79□□□□□ -1.48
CISHQ9NSE2 MED28P3-201ENST00000444288 531 ntBASIC5.79□□□□□ -1.48
CISHQ9NSE2 AC092754.1-201ENST00000472975 479 ntBASIC5.79□□□□□ -1.48
CISHQ9NSE2 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.79□□□□□ -1.48
CISHQ9NSE2 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.79□□□□□ -1.48
CISHQ9NSE2 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.79□□□□□ -1.48
CISHQ9NSE2 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.79□□□□□ -1.48
CISHQ9NSE2 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.79□□□□□ -1.48
CISHQ9NSE2 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.79□□□□□ -1.48
CISHQ9NSE2 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.79□□□□□ -1.48
CISHQ9NSE2 AP004607.2-201ENST00000533949 322 ntBASIC5.79□□□□□ -1.48
CISHQ9NSE2 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.79□□□□□ -1.48
CISHQ9NSE2 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CISHQ9NSE2 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.79□□□□□ -1.48
CISHQ9NSE2 AC060766.1-201ENST00000590824 627 ntBASIC5.79□□□□□ -1.48
CISHQ9NSE2 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.79□□□□□ -1.48
CISHQ9NSE2 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.79□□□□□ -1.48
CISHQ9NSE2 AL359513.1-201ENST00000614364 557 ntBASIC5.79□□□□□ -1.48
CISHQ9NSE2 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CISHQ9NSE2 AL049767.1-202ENST00000637826 242 ntBASIC5.79□□□□□ -1.48
CISHQ9NSE2 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CISHQ9NSE2 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
CISHQ9NSE2 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CISHQ9NSE2 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CISHQ9NSE2 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CISHQ9NSE2 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CISHQ9NSE2 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CISHQ9NSE2 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CISHQ9NSE2 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CISHQ9NSE2 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CISHQ9NSE2 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CISHQ9NSE2 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CISHQ9NSE2 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CISHQ9NSE2 RNA5SP335-201ENST00000363817 110 ntBASIC5.78□□□□□ -1.48
CISHQ9NSE2 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CISHQ9NSE2 OR3A2-201ENST00000408891 1076 ntBASIC5.78□□□□□ -1.48
CISHQ9NSE2 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.78□□□□□ -1.48
CISHQ9NSE2 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.78□□□□□ -1.48
CISHQ9NSE2 AC009784.1-201ENST00000426484 460 ntBASIC5.78□□□□□ -1.48
CISHQ9NSE2 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.78□□□□□ -1.48
CISHQ9NSE2 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.78□□□□□ -1.48
CISHQ9NSE2 CYCSP12-201ENST00000437729 300 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms