Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 MIR1286-201ENST00000408112 78 ntBASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 RN7SKP273-201ENST00000411392 314 ntBASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 METTL15P3-201ENST00000415522 1221 ntBASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 DSTNP5-201ENST00000427921 523 ntBASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 AC009963.4-201ENST00000448535 339 ntBASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 RNU6-941P-201ENST00000516346 108 ntBASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 SCARNA20.4-201ENST00000516969 131 ntBASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 AC004825.1-201ENST00000555068 586 ntBASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 AGGF1P7-201ENST00000562369 913 ntBASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 AL513327.3-201ENST00000602618 469 ntBASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 RN7SKP185-201ENST00000362813 326 ntBASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 SNORA74A-201ENST00000364089 198 ntBASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 SPTLC1P2-201ENST00000407089 121 ntBASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 OR52B5P-201ENST00000435337 951 ntBASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 CNOT7P2-201ENST00000441051 832 ntBASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 GAPDHP25-201ENST00000447061 1001 ntBASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 AC005532.2-201ENST00000467154 373 ntBASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 AC092944.2-201ENST00000605443 889 ntBASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 OR52B5P-202ENST00000641118 1110 ntBASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 AC079776.5-201ENST00000641920 211 ntBASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
KIAA1549Q9HCM3 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC4.92□□□□□ -1.62
KIAA1549Q9HCM3 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KIAA1549Q9HCM3 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
KIAA1549Q9HCM3 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC4.92□□□□□ -1.62
KIAA1549Q9HCM3 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC4.92□□□□□ -1.62
KIAA1549Q9HCM3 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
KIAA1549Q9HCM3 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC4.92□□□□□ -1.62
KIAA1549Q9HCM3 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC4.92□□□□□ -1.62
KIAA1549Q9HCM3 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
KIAA1549Q9HCM3 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KIAA1549Q9HCM3 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
KIAA1549Q9HCM3 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
KIAA1549Q9HCM3 RNU11-201ENST00000387069 134 ntBASIC4.92□□□□□ -1.62
KIAA1549Q9HCM3 FIGN-202ENST00000409634 746 ntTSL 5 BASIC4.92□□□□□ -1.62
KIAA1549Q9HCM3 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.92□□□□□ -1.62
KIAA1549Q9HCM3 AC007394.1-201ENST00000421941 531 ntBASIC4.92□□□□□ -1.62
KIAA1549Q9HCM3 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.92□□□□□ -1.62
KIAA1549Q9HCM3 AC015864.1-201ENST00000496512 544 ntBASIC4.92□□□□□ -1.62
KIAA1549Q9HCM3 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC4.92□□□□□ -1.62
KIAA1549Q9HCM3 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC4.92□□□□□ -1.62
KIAA1549Q9HCM3 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.92□□□□□ -1.62
KIAA1549Q9HCM3 RN7SL356P-201ENST00000582228 248 ntBASIC4.92□□□□□ -1.62
KIAA1549Q9HCM3 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC4.92□□□□□ -1.62
KIAA1549Q9HCM3 AL360012.1-201ENST00000602813 131 ntBASIC4.92□□□□□ -1.62
KIAA1549Q9HCM3 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC4.92□□□□□ -1.62
KIAA1549Q9HCM3 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
KIAA1549Q9HCM3 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KIAA1549Q9HCM3 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
KIAA1549Q9HCM3 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KIAA1549Q9HCM3 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
KIAA1549Q9HCM3 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KIAA1549Q9HCM3 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
KIAA1549Q9HCM3 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.92□□□□□ -1.62
KIAA1549Q9HCM3 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KIAA1549Q9HCM3 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms