Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC129778.1-202ENST00000623812 261 ntBASIC5.07□□□□□ -1.6
RSPO3Q9BXY4 AL591379.1-207ENST00000635982 261 ntBASIC5.07□□□□□ -1.6
RSPO3Q9BXY4 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.07□□□□□ -1.6
RSPO3Q9BXY4 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
RSPO3Q9BXY4 AC087565.3-203ENST00000641018 837 ntBASIC5.07□□□□□ -1.6
RSPO3Q9BXY4 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RSPO3Q9BXY4 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
RSPO3Q9BXY4 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RSPO3Q9BXY4 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
RSPO3Q9BXY4 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RSPO3Q9BXY4 MT-RNR2-201ENST00000387347 1559 ntBASIC5.07□□□□□ -1.6
RSPO3Q9BXY4 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
RSPO3Q9BXY4 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
RSPO3Q9BXY4 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RSPO3Q9BXY4 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
RSPO3Q9BXY4 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RSPO3Q9BXY4 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RSPO3Q9BXY4 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.07□□□□□ -1.6
RSPO3Q9BXY4 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RSPO3Q9BXY4 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 LINC02019-201ENST00000608605 2060 ntBASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 NACAP7-201ENST00000407371 609 ntBASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 CDY17P-201ENST00000414121 1282 ntBASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 AC087672.1-201ENST00000479876 766 ntBASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 RNA5SP271-201ENST00000516700 88 ntBASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 AC027369.5-201ENST00000533838 755 ntBASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 AC016839.1-201ENST00000578162 867 ntBASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 MIR3614-201ENST00000581261 86 ntBASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 MIR4443-201ENST00000585052 53 ntBASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 AC109309.2-201ENST00000612597 332 ntBASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 AP000473.2-201ENST00000602659 1537 ntBASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 AL078621.3-201ENST00000623707 2042 ntBASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.06□□□□□ -1.6
RSPO3Q9BXY4 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RSPO3Q9BXY4 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
RSPO3Q9BXY4 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RSPO3Q9BXY4 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.05□□□□□ -1.6
RSPO3Q9BXY4 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
RSPO3Q9BXY4 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RSPO3Q9BXY4 AC093671.1-201ENST00000624981 2929 ntBASIC5.05□□□□□ -1.6
RSPO3Q9BXY4 CIR1P2-201ENST00000514821 1342 ntBASIC5.05□□□□□ -1.6
RSPO3Q9BXY4 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
RSPO3Q9BXY4 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.05□□□□□ -1.6
RSPO3Q9BXY4 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RSPO3Q9BXY4 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.05□□□□□ -1.6
RSPO3Q9BXY4 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
RSPO3Q9BXY4 MIR375-201ENST00000362103 64 ntBASIC5.05□□□□□ -1.6
RSPO3Q9BXY4 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RSPO3Q9BXY4 SLC20A1P1-201ENST00000413906 956 ntBASIC5.05□□□□□ -1.6
RSPO3Q9BXY4 Z68694.1-201ENST00000413929 841 ntBASIC5.05□□□□□ -1.6
RSPO3Q9BXY4 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RSPO3Q9BXY4 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.05□□□□□ -1.6
RSPO3Q9BXY4 IGBP1P3-201ENST00000447449 1000 ntBASIC5.05□□□□□ -1.6
RSPO3Q9BXY4 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
RSPO3Q9BXY4 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.05□□□□□ -1.6
RSPO3Q9BXY4 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.05□□□□□ -1.6
RSPO3Q9BXY4 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
RSPO3Q9BXY4 AC090286.3-201ENST00000573133 187 ntBASIC5.05□□□□□ -1.6
RSPO3Q9BXY4 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.05□□□□□ -1.6
RSPO3Q9BXY4 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.05□□□□□ -1.6
RSPO3Q9BXY4 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.05□□□□□ -1.6
RSPO3Q9BXY4 AL356608.1-201ENST00000610034 820 ntBASIC5.05□□□□□ -1.6
RSPO3Q9BXY4 MIR6768-201ENST00000610734 72 ntBASIC5.05□□□□□ -1.6
RSPO3Q9BXY4 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RSPO3Q9BXY4 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.05□□□□□ -1.6
RSPO3Q9BXY4 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.05□□□□□ -1.6
RSPO3Q9BXY4 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.05□□□□□ -1.6
RSPO3Q9BXY4 MAPK10-328ENST00000641553 4009 ntBASIC5.05□□□□□ -1.6
RSPO3Q9BXY4 AP002512.4-202ENST00000641599 4530 ntBASIC5.05□□□□□ -1.6
RSPO3Q9BXY4 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms