Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
CDK5RAP1Q96SZ6 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.46□□□□□ -1.37
CDK5RAP1Q96SZ6 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
CDK5RAP1Q96SZ6 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
CDK5RAP1Q96SZ6 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CDK5RAP1Q96SZ6 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
CDK5RAP1Q96SZ6 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 RNU6-152P-201ENST00000384037 107 ntBASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 RN7SKP161-201ENST00000411110 305 ntBASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 AC245060.4-201ENST00000413293 1121 ntBASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 RPS3AP44-201ENST00000425466 790 ntBASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 AL355355.1-201ENST00000442900 793 ntBASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 MTND2P4-201ENST00000445034 1004 ntBASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 Z83838.1-202ENST00000456225 839 ntBASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 SNORA70.17-201ENST00000516449 133 ntBASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 RNA5SP434-201ENST00000516647 121 ntBASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 BCAS2P1-201ENST00000528022 632 ntBASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 CKS1BP1-201ENST00000555221 240 ntBASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 AC134669.1-201ENST00000581275 672 ntBASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 AC008507.3-201ENST00000585753 472 ntBASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 VN1R78P-201ENST00000597393 564 ntBASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 NTAN1P1-201ENST00000603150 646 ntBASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 AL353600.1-201ENST00000608148 251 ntBASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 MIR6071-201ENST00000616741 78 ntBASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 AP003789.1-201ENST00000617737 605 ntBASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 AC008115.4-201ENST00000619780 775 ntBASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 AC073534.2-201ENST00000620377 381 ntBASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 BX649567.1-201ENST00000642071 1134 ntBASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 AC110373.1-201ENST00000505994 3505 ntBASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CDK5RAP1Q96SZ6 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 AC021755.1-201ENST00000559747 1447 ntBASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 RNU1-134P-201ENST00000362935 165 ntBASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 TIMM9P2-201ENST00000419324 266 ntBASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 AMYP1-201ENST00000440059 1023 ntBASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 PCNPP2-201ENST00000441651 455 ntBASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 GAPDHP23-201ENST00000444823 993 ntBASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 RPL5P10-201ENST00000445207 894 ntBASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 224.5 ms