Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.89□□□□□ -1.47
CCDC42Q96M95 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.89□□□□□ -1.47
CCDC42Q96M95 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC42Q96M95 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.89□□□□□ -1.47
CCDC42Q96M95 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.89□□□□□ -1.47
CCDC42Q96M95 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC42Q96M95 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC42Q96M95 RN7SL544P-201ENST00000617232 284 ntBASIC5.89□□□□□ -1.47
CCDC42Q96M95 RN7SL763P-201ENST00000620922 284 ntBASIC5.89□□□□□ -1.47
CCDC42Q96M95 AC091932.2-201ENST00000623014 291 ntBASIC5.89□□□□□ -1.47
CCDC42Q96M95 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC42Q96M95 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CCDC42Q96M95 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC42Q96M95 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC42Q96M95 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC42Q96M95 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC42Q96M95 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CCDC42Q96M95 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC42Q96M95 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CCDC42Q96M95 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC42Q96M95 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC42Q96M95 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC42Q96M95 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC42Q96M95 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC42Q96M95 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
CCDC42Q96M95 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CCDC42Q96M95 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CCDC42Q96M95 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC42Q96M95 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CCDC42Q96M95 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC42Q96M95 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC42Q96M95 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.88□□□□□ -1.47
CCDC42Q96M95 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC42Q96M95 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CCDC42Q96M95 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CCDC42Q96M95 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC42Q96M95 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC42Q96M95 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
CCDC42Q96M95 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC42Q96M95 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC42Q96M95 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.88□□□□□ -1.47
CCDC42Q96M95 HSPD1P12-201ENST00000429127 1069 ntBASIC5.88□□□□□ -1.47
CCDC42Q96M95 AL049874.2-201ENST00000492636 288 ntBASIC5.88□□□□□ -1.47
CCDC42Q96M95 AC025458.1-201ENST00000506046 166 ntBASIC5.88□□□□□ -1.47
CCDC42Q96M95 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.88□□□□□ -1.47
CCDC42Q96M95 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC42Q96M95 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC42Q96M95 AC016559.2-201ENST00000510759 359 ntBASIC5.88□□□□□ -1.47
CCDC42Q96M95 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC42Q96M95 MRPS16P1-201ENST00000523462 412 ntBASIC5.88□□□□□ -1.47
CCDC42Q96M95 AC027369.2-201ENST00000528030 440 ntBASIC5.88□□□□□ -1.47
CCDC42Q96M95 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.88□□□□□ -1.47
CCDC42Q96M95 DPPA2P4-201ENST00000563717 878 ntBASIC5.88□□□□□ -1.47
CCDC42Q96M95 ARGFXP2-201ENST00000579304 949 ntBASIC5.88□□□□□ -1.47
CCDC42Q96M95 AC138207.8-204ENST00000579588 527 ntBASIC5.88□□□□□ -1.47
CCDC42Q96M95 AC129778.1-202ENST00000623812 261 ntBASIC5.88□□□□□ -1.47
CCDC42Q96M95 AL591379.1-207ENST00000635982 261 ntBASIC5.88□□□□□ -1.47
CCDC42Q96M95 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.88□□□□□ -1.47
CCDC42Q96M95 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.88□□□□□ -1.47
CCDC42Q96M95 OR9K1P-202ENST00000641111 3217 ntBASIC5.88□□□□□ -1.47
CCDC42Q96M95 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CCDC42Q96M95 AC090181.3-201ENST00000624777 1514 ntBASIC5.88□□□□□ -1.47
CCDC42Q96M95 AC063923.1-201ENST00000478982 1619 ntBASIC5.88□□□□□ -1.47
CCDC42Q96M95 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC42Q96M95 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
CCDC42Q96M95 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC42Q96M95 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC42Q96M95 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC42Q96M95 MIR551A-201ENST00000385042 96 ntBASIC5.87□□□□□ -1.47
CCDC42Q96M95 GNG5P5-201ENST00000420444 220 ntBASIC5.87□□□□□ -1.47
CCDC42Q96M95 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC42Q96M95 AC073476.1-201ENST00000452854 407 ntBASIC5.87□□□□□ -1.47
CCDC42Q96M95 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC42Q96M95 ACA64.1-201ENST00000459171 127 ntBASIC5.87□□□□□ -1.47
CCDC42Q96M95 RPL12P24-201ENST00000474907 486 ntBASIC5.87□□□□□ -1.47
CCDC42Q96M95 OR8G3P-201ENST00000533406 921 ntBASIC5.87□□□□□ -1.47
CCDC42Q96M95 OR11H3P-201ENST00000554547 982 ntBASIC5.87□□□□□ -1.47
CCDC42Q96M95 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC42Q96M95 AP005403.1-201ENST00000579720 229 ntBASIC5.87□□□□□ -1.47
CCDC42Q96M95 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC42Q96M95 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC42Q96M95 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.87□□□□□ -1.47
CCDC42Q96M95 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC42Q96M95 AC006363.1-201ENST00000603806 463 ntBASIC5.87□□□□□ -1.47
CCDC42Q96M95 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC42Q96M95 AC135068.5-201ENST00000624197 983 ntBASIC5.87□□□□□ -1.47
CCDC42Q96M95 AC087565.3-203ENST00000641018 837 ntBASIC5.87□□□□□ -1.47
CCDC42Q96M95 NEPNP-201ENST00000404786 1371 ntBASIC5.87□□□□□ -1.47
CCDC42Q96M95 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.87□□□□□ -1.47
CCDC42Q96M95 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.87□□□□□ -1.47
CCDC42Q96M95 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC42Q96M95 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
CCDC42Q96M95 AC139426.3-201ENST00000605648 2059 ntBASIC5.87□□□□□ -1.47
CCDC42Q96M95 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC42Q96M95 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC42Q96M95 AC093849.1-201ENST00000563631 2209 ntBASIC5.87□□□□□ -1.47
CCDC42Q96M95 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
CCDC42Q96M95 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
CCDC42Q96M95 AL138820.1-201ENST00000617901 5305 ntBASIC5.87□□□□□ -1.47
CCDC42Q96M95 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms