Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.56□□□□□ -1.52
VPS33AQ96AX1 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.56□□□□□ -1.52
VPS33AQ96AX1 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
VPS33AQ96AX1 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS33AQ96AX1 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
VPS33AQ96AX1 MIR421-201ENST00000365696 85 ntBASIC5.56□□□□□ -1.52
VPS33AQ96AX1 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS33AQ96AX1 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
VPS33AQ96AX1 MIR188-201ENST00000385034 86 ntBASIC5.56□□□□□ -1.52
VPS33AQ96AX1 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
VPS33AQ96AX1 MTND3P20-201ENST00000407663 186 ntBASIC5.56□□□□□ -1.52
VPS33AQ96AX1 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS33AQ96AX1 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS33AQ96AX1 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.56□□□□□ -1.52
VPS33AQ96AX1 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS33AQ96AX1 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.56□□□□□ -1.52
VPS33AQ96AX1 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VPS33AQ96AX1 AC093716.1-201ENST00000435923 377 ntBASIC5.56□□□□□ -1.52
VPS33AQ96AX1 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS33AQ96AX1 AC023141.3-201ENST00000436698 278 ntBASIC5.56□□□□□ -1.52
VPS33AQ96AX1 MTND2P40-201ENST00000436718 841 ntBASIC5.56□□□□□ -1.52
VPS33AQ96AX1 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.56□□□□□ -1.52
VPS33AQ96AX1 TRIM60P16-201ENST00000444048 694 ntBASIC5.56□□□□□ -1.52
VPS33AQ96AX1 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.56□□□□□ -1.52
VPS33AQ96AX1 AC023271.1-201ENST00000445936 1090 ntBASIC5.56□□□□□ -1.52
VPS33AQ96AX1 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS33AQ96AX1 CALM1P2-201ENST00000452941 448 ntBASIC5.56□□□□□ -1.52
VPS33AQ96AX1 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS33AQ96AX1 RNU1-88P-201ENST00000459274 128 ntBASIC5.56□□□□□ -1.52
VPS33AQ96AX1 RN7SL72P-201ENST00000460697 269 ntBASIC5.56□□□□□ -1.52
VPS33AQ96AX1 RPS7P10-201ENST00000464254 603 ntBASIC5.56□□□□□ -1.52
VPS33AQ96AX1 AC025181.1-201ENST00000477507 416 ntBASIC5.56□□□□□ -1.52
VPS33AQ96AX1 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS33AQ96AX1 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS33AQ96AX1 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS33AQ96AX1 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS33AQ96AX1 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.56□□□□□ -1.52
VPS33AQ96AX1 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS33AQ96AX1 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS33AQ96AX1 AC009852.2-201ENST00000567898 485 ntBASIC5.56□□□□□ -1.52
VPS33AQ96AX1 AC027216.1-201ENST00000577726 685 ntBASIC5.56□□□□□ -1.52
VPS33AQ96AX1 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS33AQ96AX1 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS33AQ96AX1 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS33AQ96AX1 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VPS33AQ96AX1 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS33AQ96AX1 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS33AQ96AX1 AC239803.2-201ENST00000610161 430 ntBASIC5.56□□□□□ -1.52
VPS33AQ96AX1 AC012676.3-201ENST00000614983 479 ntBASIC5.56□□□□□ -1.52
VPS33AQ96AX1 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS33AQ96AX1 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS33AQ96AX1 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS33AQ96AX1 AC010325.3-201ENST00000641084 394 ntBASIC5.56□□□□□ -1.52
VPS33AQ96AX1 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
VPS33AQ96AX1 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VPS33AQ96AX1 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
VPS33AQ96AX1 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
VPS33AQ96AX1 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
VPS33AQ96AX1 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 AC005005.4-201ENST00000623789 16698 ntBASIC5.55□□□□□ -1.52
VPS33AQ96AX1 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 KARSP1-201ENST00000451871 1752 ntBASIC5.55□□□□□ -1.52
VPS33AQ96AX1 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 GNL2P1-201ENST00000451274 2190 ntBASIC5.55□□□□□ -1.52
VPS33AQ96AX1 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 RN7SKP185-201ENST00000362813 326 ntBASIC5.55□□□□□ -1.52
VPS33AQ96AX1 RNU6-249P-201ENST00000363016 102 ntBASIC5.55□□□□□ -1.52
VPS33AQ96AX1 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 MT-TP-201ENST00000387461 68 ntBASIC5.55□□□□□ -1.52
VPS33AQ96AX1 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 AL035422.1-201ENST00000414193 397 ntBASIC5.55□□□□□ -1.52
VPS33AQ96AX1 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 AL121878.1-201ENST00000418638 859 ntBASIC5.55□□□□□ -1.52
VPS33AQ96AX1 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 HMGN2P27-201ENST00000427352 270 ntBASIC5.55□□□□□ -1.52
VPS33AQ96AX1 RPL23AP4-201ENST00000427757 463 ntBASIC5.55□□□□□ -1.52
VPS33AQ96AX1 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 AC023141.8-201ENST00000442554 208 ntBASIC5.55□□□□□ -1.52
VPS33AQ96AX1 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS33AQ96AX1 AL157777.1-201ENST00000468100 304 ntBASIC5.55□□□□□ -1.52
VPS33AQ96AX1 OR7E22P-201ENST00000478335 1035 ntBASIC5.55□□□□□ -1.52
VPS33AQ96AX1 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms