Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 AC131935.1-201ENST00000524621 333 ntBASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 AC093249.1-201ENST00000567049 203 ntBASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 AC092032.1-201ENST00000603090 165 ntBASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 AL031777.2-201ENST00000611953 196 ntBASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 AL592295.2-201ENST00000612578 206 ntBASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 OR8G7P-201ENST00000616658 848 ntBASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 AC009248.2-201ENST00000619826 254 ntBASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 AC078909.2-201ENST00000620584 398 ntBASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 AC090971.5-201ENST00000621102 293 ntBASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 AC015908.5-201ENST00000623289 343 ntBASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 AC012629.3-201ENST00000623397 328 ntBASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 AC211433.3-201ENST00000623770 375 ntBASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 AC006065.6-201ENST00000625201 545 ntBASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 AC079777.1-201ENST00000623836 1953 ntBASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 CACNA1D-219ENST00000636938 6868 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 RBPJP6-201ENST00000411556 1431 ntBASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 AL031651.1-201ENST00000615357 1438 ntBASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 NASP-203ENST00000372052 1458 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 TTC41P-204ENST00000548897 2998 ntTSL 5 BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 ZNF849P-201ENST00000594711 1566 ntBASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 UGT2B26P-201ENST00000508672 1613 ntBASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 HSP90AB7P-201ENST00000450068 2454 ntBASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 ASIC5-201ENST00000537611 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 XIST-206ENST00000434839 2865 ntTSL 5 BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 MAPK10-347ENST00000641762 2856 ntBASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 AC093616.1-201ENST00000427434 2095 ntBASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 AC087501.5-201ENST00000607496 2374 ntBASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 OR10D1P-201ENST00000355343 936 ntBASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 RN7SKP184-201ENST00000362348 333 ntBASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 RNU6-845P-201ENST00000362578 103 ntBASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 RNU6-252P-201ENST00000363232 107 ntBASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 RNU12-2P-201ENST00000364789 156 ntBASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 AL451142.1-201ENST00000375867 775 ntBASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 MIR568-201ENST00000385036 95 ntBASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 RNU1-56P-201ENST00000391303 164 ntBASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 RPS24P12-201ENST00000402084 394 ntBASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 AC009161.1-201ENST00000417306 376 ntBASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 FAM183DP-201ENST00000421987 399 ntBASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 EEF1GP7-201ENST00000422983 703 ntBASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 AL160175.1-201ENST00000428124 247 ntBASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 RPL23AP76-201ENST00000441860 458 ntBASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 FAR2P1-206ENST00000449736 709 ntBASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 RPS24P6-201ENST00000452670 400 ntBASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 RPS16P9-201ENST00000477220 427 ntBASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 AC117394.1-201ENST00000477323 567 ntBASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 HMGB1P3-201ENST00000502802 616 ntBASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 RNU6-406P-201ENST00000516470 107 ntBASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 SEC11B-201ENST00000518383 499 ntBASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 IGKV3D-31-201ENST00000519131 281 ntBASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC7.66□□□□□ -1.18
NPAS3Q8IXF0 MTCO3P15-201ENST00000526563 574 ntBASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms