Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 AP001267.4-201ENST00000602598 545 ntBASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 AL137072.1-201ENST00000603444 466 ntBASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 AL138960.1-201ENST00000613838 513 ntBASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 AP003499.2-201ENST00000624100 483 ntBASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 AL139254.3-201ENST00000641097 674 ntBASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 AC005725.1-201ENST00000577346 2607 ntBASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 SELENOWP1-201ENST00000322792 252 ntBASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 AL589826.1-201ENST00000340697 249 ntBASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 SUGT1P2-201ENST00000379452 992 ntBASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 AC233289.1-201ENST00000403700 508 ntBASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 AC016739.1-201ENST00000405359 345 ntBASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 RN7SKP240-201ENST00000410583 375 ntBASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 KIF4CP-201ENST00000422742 1279 ntBASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 AC099677.3-201ENST00000427081 395 ntBASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 AL445928.1-201ENST00000435545 222 ntBASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 KRT8P51-201ENST00000438938 274 ntBASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 AL138899.2-201ENST00000439139 499 ntBASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 AL591623.2-201ENST00000449978 222 ntBASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 MTND2P3-201ENST00000452458 470 ntBASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 AL122020.1-201ENST00000472287 459 ntBASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 RN7SL193P-201ENST00000491708 276 ntBASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 TRIM77BP-201ENST00000524985 1119 ntBASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 AC008147.3-201ENST00000548666 354 ntBASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 SNRPGP1-201ENST00000553864 222 ntBASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 uc_338.26-201ENST00000612659 160 ntBASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 AC004656.1-201ENST00000568479 4951 ntBASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 BRAFP1-201ENST00000445336 2703 ntBASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.48□□□□□ -1.53
NUP54Q7Z3B4 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 IMMTP1-201ENST00000435590 2219 ntBASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 MT-RNR2-201ENST00000387347 1559 ntBASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 AC027088.4-201ENST00000611559 1947 ntBASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 RNA5SP211-201ENST00000365516 117 ntBASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 AL034403.1-201ENST00000399414 885 ntBASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 PEX12P1-201ENST00000400284 1048 ntBASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 MTCYBP7-201ENST00000419540 1134 ntBASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 AC013470.3-201ENST00000420252 1194 ntBASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 AKR1B10P1-201ENST00000425765 942 ntBASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms