Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AL512593.1-201ENST00000444758 779 ntBASIC3.81□□□□□ -1.8
SCXQ7RTU7 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC3.81□□□□□ -1.8
SCXQ7RTU7 RPL7L1P3-201ENST00000455249 689 ntBASIC3.81□□□□□ -1.8
SCXQ7RTU7 AC073594.1-201ENST00000462065 364 ntBASIC3.81□□□□□ -1.8
SCXQ7RTU7 RN7SL269P-201ENST00000467795 305 ntBASIC3.81□□□□□ -1.8
SCXQ7RTU7 AC023245.1-201ENST00000468501 517 ntBASIC3.81□□□□□ -1.8
SCXQ7RTU7 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
SCXQ7RTU7 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC3.81□□□□□ -1.8
SCXQ7RTU7 AC074386.1-201ENST00000476560 767 ntBASIC3.81□□□□□ -1.8
SCXQ7RTU7 RPL5P22-201ENST00000480199 884 ntBASIC3.81□□□□□ -1.8
SCXQ7RTU7 OR9N1P-201ENST00000491296 333 ntBASIC3.81□□□□□ -1.8
SCXQ7RTU7 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
SCXQ7RTU7 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SCXQ7RTU7 ENSA-211ENST00000503345 793 ntTSL 3 BASIC3.81□□□□□ -1.8
SCXQ7RTU7 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC3.81□□□□□ -1.8
SCXQ7RTU7 AC111000.5-201ENST00000506559 1178 ntBASIC3.81□□□□□ -1.8
SCXQ7RTU7 ST13P12-201ENST00000508958 1094 ntBASIC3.81□□□□□ -1.8
SCXQ7RTU7 SNORA70.20-201ENST00000516848 126 ntBASIC3.81□□□□□ -1.8
SCXQ7RTU7 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC3.81□□□□□ -1.8
SCXQ7RTU7 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC3.81□□□□□ -1.8
SCXQ7RTU7 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC3.81□□□□□ -1.8
SCXQ7RTU7 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC3.81□□□□□ -1.8
SCXQ7RTU7 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC3.81□□□□□ -1.8
SCXQ7RTU7 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC3.81□□□□□ -1.8
SCXQ7RTU7 GNG2-208ENST00000554875 430 ntTSL 5 BASIC3.81□□□□□ -1.8
SCXQ7RTU7 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
SCXQ7RTU7 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC3.81□□□□□ -1.8
SCXQ7RTU7 AC020978.7-201ENST00000575953 1187 ntBASIC3.81□□□□□ -1.8
SCXQ7RTU7 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
SCXQ7RTU7 AC007448.1-201ENST00000582714 234 ntBASIC3.81□□□□□ -1.8
SCXQ7RTU7 AC025857.2-201ENST00000602711 238 ntBASIC3.81□□□□□ -1.8
SCXQ7RTU7 FAM27E4-201ENST00000605259 342 ntBASIC3.81□□□□□ -1.8
SCXQ7RTU7 AC015849.6-201ENST00000605454 474 ntBASIC3.81□□□□□ -1.8
SCXQ7RTU7 AL021368.3-201ENST00000607119 578 ntBASIC3.81□□□□□ -1.8
SCXQ7RTU7 AC004477.3-201ENST00000614061 590 ntBASIC3.81□□□□□ -1.8
SCXQ7RTU7 AC073575.2-201ENST00000614212 627 ntBASIC3.81□□□□□ -1.8
SCXQ7RTU7 RNA5SP439-201ENST00000617595 124 ntBASIC3.81□□□□□ -1.8
SCXQ7RTU7 AC006840.1-201ENST00000623069 542 ntBASIC3.81□□□□□ -1.8
SCXQ7RTU7 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC3.81□□□□□ -1.8
SCXQ7RTU7 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC3.81□□□□□ -1.8
SCXQ7RTU7 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SCXQ7RTU7 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SCXQ7RTU7 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SCXQ7RTU7 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC3.81□□□□□ -1.8
SCXQ7RTU7 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SCXQ7RTU7 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SCXQ7RTU7 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC3.81□□□□□ -1.8
SCXQ7RTU7 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SCXQ7RTU7 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
SCXQ7RTU7 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
SCXQ7RTU7 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
SCXQ7RTU7 HDAC1P2-201ENST00000453661 1398 ntBASIC3.8□□□□□ -1.8
SCXQ7RTU7 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
SCXQ7RTU7 AC144833.1-201ENST00000567953 4089 ntBASIC3.8□□□□□ -1.8
SCXQ7RTU7 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC3.8□□□□□ -1.8
SCXQ7RTU7 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SCXQ7RTU7 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SCXQ7RTU7 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC3.8□□□□□ -1.8
SCXQ7RTU7 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SCXQ7RTU7 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
SCXQ7RTU7 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SCXQ7RTU7 FIGN-202ENST00000409634 746 ntTSL 5 BASIC3.8□□□□□ -1.8
SCXQ7RTU7 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC3.8□□□□□ -1.8
SCXQ7RTU7 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC3.8□□□□□ -1.8
SCXQ7RTU7 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC3.8□□□□□ -1.8
SCXQ7RTU7 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC3.8□□□□□ -1.8
SCXQ7RTU7 NMD3P2-201ENST00000421815 761 ntBASIC3.8□□□□□ -1.8
SCXQ7RTU7 AC126120.1-201ENST00000431082 470 ntBASIC3.8□□□□□ -1.8
SCXQ7RTU7 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC3.8□□□□□ -1.8
SCXQ7RTU7 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC3.8□□□□□ -1.8
SCXQ7RTU7 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC3.8□□□□□ -1.8
SCXQ7RTU7 RPSAP41-201ENST00000439695 860 ntBASIC3.8□□□□□ -1.8
SCXQ7RTU7 AC064862.4-201ENST00000442180 334 ntBASIC3.8□□□□□ -1.8
SCXQ7RTU7 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC3.8□□□□□ -1.8
SCXQ7RTU7 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SCXQ7RTU7 YWHAEP1-201ENST00000453697 763 ntBASIC3.8□□□□□ -1.8
SCXQ7RTU7 RPL7AP10-201ENST00000481016 791 ntBASIC3.8□□□□□ -1.8
SCXQ7RTU7 AC124945.1-201ENST00000485133 188 ntBASIC3.8□□□□□ -1.8
SCXQ7RTU7 OR11I1P-201ENST00000486033 954 ntBASIC3.8□□□□□ -1.8
SCXQ7RTU7 RN7SL57P-201ENST00000493687 290 ntBASIC3.8□□□□□ -1.8
SCXQ7RTU7 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC3.8□□□□□ -1.8
SCXQ7RTU7 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC3.8□□□□□ -1.8
SCXQ7RTU7 RPL7L1P4-201ENST00000513004 707 ntBASIC3.8□□□□□ -1.8
SCXQ7RTU7 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC3.8□□□□□ -1.8
SCXQ7RTU7 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SCXQ7RTU7 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC3.8□□□□□ -1.8
SCXQ7RTU7 AP000648.1-201ENST00000529682 397 ntBASIC3.8□□□□□ -1.8
SCXQ7RTU7 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC3.8□□□□□ -1.8
SCXQ7RTU7 AC135626.1-201ENST00000556983 435 ntBASIC3.8□□□□□ -1.8
SCXQ7RTU7 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC3.8□□□□□ -1.8
SCXQ7RTU7 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC3.8□□□□□ -1.8
SCXQ7RTU7 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC3.8□□□□□ -1.8
SCXQ7RTU7 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC3.8□□□□□ -1.8
SCXQ7RTU7 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC3.8□□□□□ -1.8
SCXQ7RTU7 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC3.8□□□□□ -1.8
SCXQ7RTU7 MIR132-201ENST00000591554 101 ntBASIC3.8□□□□□ -1.8
SCXQ7RTU7 AC006272.2-201ENST00000594725 163 ntBASIC3.8□□□□□ -1.8
SCXQ7RTU7 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SCXQ7RTU7 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SCXQ7RTU7 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms