Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 AC004158.1-201ENST00000564508 4319 ntBASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.24□□□□□ -1.57
NHLRC1Q6VVB1 OR51C1P-202ENST00000641159 1444 ntBASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 AC015689.2-201ENST00000528172 1738 ntBASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 AL606537.1-201ENST00000607258 2011 ntBASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 AC007342.7-201ENST00000624610 2337 ntBASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 BX284632.2-201ENST00000421091 399 ntBASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 BX276092.6-201ENST00000430476 250 ntBASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 AL606490.8-201ENST00000441624 319 ntBASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 AL512605.1-202ENST00000441919 381 ntBASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 AL359955.2-201ENST00000445380 353 ntBASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 BX276092.8-201ENST00000455722 250 ntBASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 AC004129.2-201ENST00000457229 287 ntBASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 RPL37P23-201ENST00000492641 294 ntBASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 AC122718.2-201ENST00000505325 591 ntBASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 RNU6-491P-201ENST00000516099 110 ntBASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 AP000648.1-201ENST00000529682 397 ntBASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 AC006530.1-201ENST00000555980 571 ntBASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 AL163952.1-202ENST00000569625 600 ntBASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 MIR4675-201ENST00000577898 77 ntBASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 AP004372.1-201ENST00000604842 844 ntBASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 AL031601.1-201ENST00000605702 394 ntBASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 AC092159.4-201ENST00000624944 550 ntBASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 AL139254.3-201ENST00000641097 674 ntBASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 OR11H2-202ENST00000641517 1085 ntBASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 AC027088.4-201ENST00000611559 1947 ntBASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 AP000473.2-201ENST00000602659 1537 ntBASIC5.23□□□□□ -1.57
NHLRC1Q6VVB1 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 AC132825.1-201ENST00000463573 2247 ntBASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 RNA5SP477-201ENST00000362639 119 ntBASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 RNA5SP500-201ENST00000364486 119 ntBASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 RN7SKP187-201ENST00000365536 330 ntBASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 AL606490.7-201ENST00000433136 191 ntBASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 NDUFS5P5-201ENST00000437256 321 ntBASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms