Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.27□□□□□ -1.57
C11orf88Q6PI97 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
C11orf88Q6PI97 SPATA2P1-201ENST00000431223 2055 ntBASIC5.27□□□□□ -1.57
C11orf88Q6PI97 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.27□□□□□ -1.57
C11orf88Q6PI97 RNA5SP453-201ENST00000362503 119 ntBASIC5.27□□□□□ -1.57
C11orf88Q6PI97 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
C11orf88Q6PI97 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
C11orf88Q6PI97 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.27□□□□□ -1.57
C11orf88Q6PI97 IGLV3-4-201ENST00000432300 244 ntBASIC5.27□□□□□ -1.57
C11orf88Q6PI97 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
C11orf88Q6PI97 LINC00328-2P-201ENST00000436585 219 ntBASIC5.27□□□□□ -1.57
C11orf88Q6PI97 GAPDHP33-201ENST00000443168 1013 ntBASIC5.27□□□□□ -1.57
C11orf88Q6PI97 PTMAP3-201ENST00000447474 330 ntBASIC5.27□□□□□ -1.57
C11orf88Q6PI97 EEF1B2P3-201ENST00000447718 678 ntBASIC5.27□□□□□ -1.57
C11orf88Q6PI97 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.27□□□□□ -1.57
C11orf88Q6PI97 RNU7-27P-201ENST00000459281 62 ntBASIC5.27□□□□□ -1.57
C11orf88Q6PI97 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.27□□□□□ -1.57
C11orf88Q6PI97 AC113367.2-201ENST00000505749 160 ntBASIC5.27□□□□□ -1.57
C11orf88Q6PI97 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.27□□□□□ -1.57
C11orf88Q6PI97 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.27□□□□□ -1.57
C11orf88Q6PI97 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.27□□□□□ -1.57
C11orf88Q6PI97 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.27□□□□□ -1.57
C11orf88Q6PI97 AC116917.1-201ENST00000520558 305 ntBASIC5.27□□□□□ -1.57
C11orf88Q6PI97 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.27□□□□□ -1.57
C11orf88Q6PI97 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.27□□□□□ -1.57
C11orf88Q6PI97 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.27□□□□□ -1.57
C11orf88Q6PI97 AC026826.3-201ENST00000561747 158 ntBASIC5.27□□□□□ -1.57
C11orf88Q6PI97 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.27□□□□□ -1.57
C11orf88Q6PI97 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.27□□□□□ -1.57
C11orf88Q6PI97 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.27□□□□□ -1.57
C11orf88Q6PI97 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.27□□□□□ -1.57
C11orf88Q6PI97 AC090616.1-201ENST00000583895 447 ntBASIC5.27□□□□□ -1.57
C11orf88Q6PI97 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.27□□□□□ -1.57
C11orf88Q6PI97 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.27□□□□□ -1.57
C11orf88Q6PI97 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.27□□□□□ -1.57
C11orf88Q6PI97 AL359715.4-201ENST00000606629 1436 ntBASIC5.27□□□□□ -1.57
C11orf88Q6PI97 AC100814.1-201ENST00000606963 623 ntBASIC5.27□□□□□ -1.57
C11orf88Q6PI97 AC005828.7-201ENST00000607331 556 ntBASIC5.27□□□□□ -1.57
C11orf88Q6PI97 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
C11orf88Q6PI97 AC012676.3-201ENST00000614983 479 ntBASIC5.27□□□□□ -1.57
C11orf88Q6PI97 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.27□□□□□ -1.57
C11orf88Q6PI97 MIR6085-201ENST00000618314 110 ntBASIC5.27□□□□□ -1.57
C11orf88Q6PI97 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.27□□□□□ -1.57
C11orf88Q6PI97 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.27□□□□□ -1.57
C11orf88Q6PI97 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
C11orf88Q6PI97 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
C11orf88Q6PI97 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
C11orf88Q6PI97 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
C11orf88Q6PI97 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
C11orf88Q6PI97 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.26□□□□□ -1.57
C11orf88Q6PI97 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
C11orf88Q6PI97 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.26□□□□□ -1.57
C11orf88Q6PI97 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.26□□□□□ -1.57
C11orf88Q6PI97 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
C11orf88Q6PI97 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.26□□□□□ -1.57
C11orf88Q6PI97 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
C11orf88Q6PI97 AC109446.4-201ENST00000623235 2755 ntBASIC5.26□□□□□ -1.57
C11orf88Q6PI97 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
C11orf88Q6PI97 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
C11orf88Q6PI97 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.26□□□□□ -1.57
C11orf88Q6PI97 RN7SKP81-201ENST00000365603 331 ntBASIC5.26□□□□□ -1.57
C11orf88Q6PI97 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
C11orf88Q6PI97 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
C11orf88Q6PI97 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
C11orf88Q6PI97 RNU6-178P-201ENST00000384631 104 ntBASIC5.26□□□□□ -1.57
C11orf88Q6PI97 MIR320B1-201ENST00000390209 79 ntBASIC5.26□□□□□ -1.57
C11orf88Q6PI97 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
C11orf88Q6PI97 AC093719.1-202ENST00000392735 373 ntBASIC5.26□□□□□ -1.57
C11orf88Q6PI97 RPL12P23-201ENST00000405880 490 ntBASIC5.26□□□□□ -1.57
C11orf88Q6PI97 RPL6P29-201ENST00000414863 865 ntBASIC5.26□□□□□ -1.57
C11orf88Q6PI97 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.26□□□□□ -1.57
C11orf88Q6PI97 AL121878.1-201ENST00000418638 859 ntBASIC5.26□□□□□ -1.57
C11orf88Q6PI97 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC5.26□□□□□ -1.57
C11orf88Q6PI97 AL354766.1-201ENST00000423396 542 ntBASIC5.26□□□□□ -1.57
C11orf88Q6PI97 AL139158.1-201ENST00000424719 340 ntBASIC5.26□□□□□ -1.57
C11orf88Q6PI97 AC099782.1-201ENST00000425889 474 ntBASIC5.26□□□□□ -1.57
C11orf88Q6PI97 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.26□□□□□ -1.57
C11orf88Q6PI97 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.26□□□□□ -1.57
C11orf88Q6PI97 AC092106.2-201ENST00000436597 487 ntBASIC5.26□□□□□ -1.57
C11orf88Q6PI97 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.26□□□□□ -1.57
C11orf88Q6PI97 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.26□□□□□ -1.57
C11orf88Q6PI97 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.26□□□□□ -1.57
C11orf88Q6PI97 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.26□□□□□ -1.57
C11orf88Q6PI97 TAAR4P-201ENST00000454843 1039 ntBASIC5.26□□□□□ -1.57
C11orf88Q6PI97 AC112187.1-201ENST00000455837 479 ntBASIC5.26□□□□□ -1.57
C11orf88Q6PI97 RPS4XP12-201ENST00000461747 709 ntBASIC5.26□□□□□ -1.57
C11orf88Q6PI97 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.26□□□□□ -1.57
C11orf88Q6PI97 RN7SL362P-201ENST00000494228 267 ntBASIC5.26□□□□□ -1.57
C11orf88Q6PI97 RPL19P11-201ENST00000495944 589 ntBASIC5.26□□□□□ -1.57
C11orf88Q6PI97 AC015864.1-201ENST00000496512 544 ntBASIC5.26□□□□□ -1.57
C11orf88Q6PI97 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
C11orf88Q6PI97 AC138866.2-201ENST00000508650 584 ntBASIC5.26□□□□□ -1.57
C11orf88Q6PI97 GUSBP9-201ENST00000510138 584 ntBASIC5.26□□□□□ -1.57
C11orf88Q6PI97 AC108157.1-201ENST00000510511 539 ntBASIC5.26□□□□□ -1.57
C11orf88Q6PI97 AC093770.1-201ENST00000511559 571 ntBASIC5.26□□□□□ -1.57
C11orf88Q6PI97 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.26□□□□□ -1.57
C11orf88Q6PI97 CYCSP25-201ENST00000525280 316 ntBASIC5.26□□□□□ -1.57
C11orf88Q6PI97 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.26□□□□□ -1.57
C11orf88Q6PI97 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.26□□□□□ -1.57
C11orf88Q6PI97 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms