Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AC092821.2-201ENST00000545710 2042 ntBASIC3.75□□□□□ -1.81
PRKDCP78527 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PRKDCP78527 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC3.75□□□□□ -1.81
PRKDCP78527 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
PRKDCP78527 AC108751.5-201ENST00000492880 1336 ntBASIC3.75□□□□□ -1.81
PRKDCP78527 GIGYF2-202ENST00000409196 5747 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PRKDCP78527 AC073365.1-203ENST00000641055 1992 ntBASIC3.75□□□□□ -1.81
PRKDCP78527 GBP4-201ENST00000355754 6127 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PRKDCP78527 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PRKDCP78527 DOCK8-209ENST00000469391 6386 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PRKDCP78527 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
PRKDCP78527 ZNF608-201ENST00000306315 5958 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PRKDCP78527 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PRKDCP78527 KRT8P51-201ENST00000438938 274 ntBASIC3.75□□□□□ -1.81
PRKDCP78527 AC114755.5-201ENST00000447760 831 ntBASIC3.75□□□□□ -1.81
PRKDCP78527 NDUFA5P8-201ENST00000449019 346 ntBASIC3.75□□□□□ -1.81
PRKDCP78527 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC3.75□□□□□ -1.81
PRKDCP78527 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.75□□□□□ -1.81
PRKDCP78527 TOMM22P4-201ENST00000511318 336 ntBASIC3.75□□□□□ -1.81
PRKDCP78527 AC012339.2-201ENST00000523996 453 ntBASIC3.75□□□□□ -1.81
PRKDCP78527 AC105129.1-201ENST00000560250 297 ntBASIC3.75□□□□□ -1.81
PRKDCP78527 MIR3200-201ENST00000580767 85 ntBASIC3.75□□□□□ -1.81
PRKDCP78527 AC027334.1-201ENST00000603257 310 ntBASIC3.75□□□□□ -1.81
PRKDCP78527 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC3.75□□□□□ -1.81
PRKDCP78527 HIVEP2-201ENST00000012134 9755 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
PRKDCP78527 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
PRKDCP78527 FRMPD3-201ENST00000276185 7304 ntAPPRIS P2 TSL 5 BASIC3.75□□□□□ -1.81
PRKDCP78527 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PRKDCP78527 FAT3-206ENST00000533797 7894 ntTSL 2 BASIC3.75□□□□□ -1.81
PRKDCP78527 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC3.74□□□□□ -1.81
PRKDCP78527 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PRKDCP78527 AC144833.1-201ENST00000567953 4089 ntBASIC3.74□□□□□ -1.81
PRKDCP78527 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
PRKDCP78527 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
PRKDCP78527 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PRKDCP78527 TEX14-202ENST00000349033 4773 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
PRKDCP78527 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PRKDCP78527 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
PRKDCP78527 AL009179.1-201ENST00000406085 265 ntBASIC3.74□□□□□ -1.81
PRKDCP78527 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PRKDCP78527 TMA16P2-201ENST00000413187 601 ntBASIC3.74□□□□□ -1.81
PRKDCP78527 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.74□□□□□ -1.81
PRKDCP78527 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
PRKDCP78527 AC119751.5-201ENST00000514077 770 ntBASIC3.74□□□□□ -1.81
PRKDCP78527 AC017100.2-201ENST00000584628 355 ntBASIC3.74□□□□□ -1.81
PRKDCP78527 AC011497.2-201ENST00000600255 639 ntBASIC3.74□□□□□ -1.81
PRKDCP78527 AC090948.1-201ENST00000607464 549 ntBASIC3.74□□□□□ -1.81
PRKDCP78527 ZYXP1-201ENST00000617638 118 ntBASIC3.74□□□□□ -1.81
PRKDCP78527 LRRC37A16P-202ENST00000586022 3725 ntBASIC3.74□□□□□ -1.81
PRKDCP78527 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC3.74□□□□□ -1.81
PRKDCP78527 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC3.74□□□□□ -1.81
PRKDCP78527 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC3.74□□□□□ -1.81
PRKDCP78527 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PRKDCP78527 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
PRKDCP78527 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PRKDCP78527 ATP5A1P1-201ENST00000454088 1321 ntBASIC3.74□□□□□ -1.81
PRKDCP78527 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
PRKDCP78527 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PRKDCP78527 SCN10A-201ENST00000449082 6418 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PRKDCP78527 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC3.74□□□□□ -1.81
PRKDCP78527 AL138960.1-201ENST00000613838 513 ntBASIC3.74□□□□□ -1.81
PRKDCP78527 RNA5SP196-201ENST00000625967 102 ntBASIC3.74□□□□□ -1.81
PRKDCP78527 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.74□□□□□ -1.81
PRKDCP78527 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PRKDCP78527 AC022034.1-201ENST00000512867 2156 ntBASIC3.74□□□□□ -1.81
PRKDCP78527 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
PRKDCP78527 ZNF423-203ENST00000561648 7907 ntAPPRIS P3 TSL 5 BASIC3.74□□□□□ -1.81
PRKDCP78527 LCORL-207ENST00000635767 10430 ntTSL 5 BASIC3.74□□□□□ -1.81
PRKDCP78527 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PRKDCP78527 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PRKDCP78527 AL121657.1-201ENST00000327215 531 ntBASIC3.74□□□□□ -1.81
PRKDCP78527 RAB9AP4-201ENST00000415230 609 ntBASIC3.74□□□□□ -1.81
PRKDCP78527 BX510359.2-201ENST00000417920 305 ntBASIC3.74□□□□□ -1.81
PRKDCP78527 RPL34P6-201ENST00000432390 345 ntBASIC3.74□□□□□ -1.81
PRKDCP78527 OR7E128P-201ENST00000532736 1024 ntBASIC3.74□□□□□ -1.81
PRKDCP78527 OR4A6P-201ENST00000534364 970 ntBASIC3.74□□□□□ -1.81
PRKDCP78527 KPNA2P3-201ENST00000584190 848 ntBASIC3.74□□□□□ -1.81
PRKDCP78527 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.74□□□□□ -1.81
PRKDCP78527 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC3.74□□□□□ -1.81
PRKDCP78527 AHCTF1-202ENST00000366508 8751 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
PRKDCP78527 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC3.74□□□□□ -1.81
PRKDCP78527 AC105046.1-201ENST00000566457 4997 ntBASIC3.74□□□□□ -1.81
PRKDCP78527 ATP8A1-201ENST00000264449 8209 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PRKDCP78527 PER3-202ENST00000377532 6279 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
PRKDCP78527 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC3.74□□□□□ -1.81
PRKDCP78527 SCAF11-202ENST00000369367 7543 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
PRKDCP78527 PRKG1-203ENST00000373980 6928 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PRKDCP78527 CDY5P-201ENST00000411487 1580 ntBASIC3.74□□□□□ -1.81
PRKDCP78527 CDY9P-201ENST00000451397 1580 ntBASIC3.74□□□□□ -1.81
PRKDCP78527 AL450345.1-202ENST00000605741 3881 ntBASIC3.74□□□□□ -1.81
PRKDCP78527 COL4A4-201ENST00000396625 9895 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
PRKDCP78527 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC3.74□□□□□ -1.81
PRKDCP78527 MYO5A-202ENST00000358212 12220 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
PRKDCP78527 MYO5A-206ENST00000399233 12220 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
PRKDCP78527 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.73□□□□□ -1.81
PRKDCP78527 MTR-202ENST00000366577 10529 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PRKDCP78527 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
PRKDCP78527 GK5-201ENST00000392993 9837 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PRKDCP78527 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PRKDCP78527 AC010326.1-201ENST00000462726 602 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms