Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.65□□□□□ -1.5
RAE1P78406 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.65□□□□□ -1.5
RAE1P78406 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RAE1P78406 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RAE1P78406 TCEA1P2-201ENST00000420496 906 ntBASIC5.65□□□□□ -1.5
RAE1P78406 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.65□□□□□ -1.5
RAE1P78406 CDY8P-201ENST00000428380 1279 ntBASIC5.65□□□□□ -1.5
RAE1P78406 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.65□□□□□ -1.5
RAE1P78406 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RAE1P78406 AL445928.1-201ENST00000435545 222 ntBASIC5.65□□□□□ -1.5
RAE1P78406 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.65□□□□□ -1.5
RAE1P78406 AC006994.1-201ENST00000438212 839 ntBASIC5.65□□□□□ -1.5
RAE1P78406 KRT8P51-201ENST00000438938 274 ntBASIC5.65□□□□□ -1.5
RAE1P78406 RPL5P7-201ENST00000444235 813 ntBASIC5.65□□□□□ -1.5
RAE1P78406 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.65□□□□□ -1.5
RAE1P78406 CDY20P-201ENST00000447528 1279 ntBASIC5.65□□□□□ -1.5
RAE1P78406 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.65□□□□□ -1.5
RAE1P78406 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RAE1P78406 SUMO1P1-201ENST00000497904 306 ntBASIC5.65□□□□□ -1.5
RAE1P78406 AC008629.2-201ENST00000503783 483 ntBASIC5.65□□□□□ -1.5
RAE1P78406 AL158068.1-201ENST00000506116 616 ntBASIC5.65□□□□□ -1.5
RAE1P78406 AC069306.1-201ENST00000507006 843 ntBASIC5.65□□□□□ -1.5
RAE1P78406 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.65□□□□□ -1.5
RAE1P78406 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.65□□□□□ -1.5
RAE1P78406 SETP21-201ENST00000514799 892 ntBASIC5.65□□□□□ -1.5
RAE1P78406 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC5.65□□□□□ -1.5
RAE1P78406 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.65□□□□□ -1.5
RAE1P78406 AC090424.1-201ENST00000535243 736 ntBASIC5.65□□□□□ -1.5
RAE1P78406 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.65□□□□□ -1.5
RAE1P78406 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.65□□□□□ -1.5
RAE1P78406 CBX3P2-202ENST00000583365 535 ntBASIC5.65□□□□□ -1.5
RAE1P78406 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.65□□□□□ -1.5
RAE1P78406 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.65□□□□□ -1.5
RAE1P78406 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.65□□□□□ -1.5
RAE1P78406 AC006115.2-201ENST00000596823 202 ntBASIC5.65□□□□□ -1.5
RAE1P78406 BMS1P7-201ENST00000602440 1052 ntBASIC5.65□□□□□ -1.5
RAE1P78406 AC124916.2-201ENST00000604416 224 ntBASIC5.65□□□□□ -1.5
RAE1P78406 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.65□□□□□ -1.5
RAE1P78406 AC092681.3-201ENST00000609463 678 ntBASIC5.65□□□□□ -1.5
RAE1P78406 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.65□□□□□ -1.5
RAE1P78406 AC124016.2-201ENST00000610058 665 ntBASIC5.65□□□□□ -1.5
RAE1P78406 AL352984.2-202ENST00000613699 155 ntBASIC5.65□□□□□ -1.5
RAE1P78406 AL138960.1-201ENST00000613838 513 ntBASIC5.65□□□□□ -1.5
RAE1P78406 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.65□□□□□ -1.5
RAE1P78406 FAM27E2-201ENST00000619668 403 ntBASIC5.65□□□□□ -1.5
RAE1P78406 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.65□□□□□ -1.51
RAE1P78406 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.65□□□□□ -1.51
RAE1P78406 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.65□□□□□ -1.51
RAE1P78406 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RAE1P78406 AC003985.2-201ENST00000562268 1669 ntBASIC5.65□□□□□ -1.51
RAE1P78406 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RAE1P78406 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RAE1P78406 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.65□□□□□ -1.51
RAE1P78406 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RAE1P78406 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
RAE1P78406 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RAE1P78406 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RAE1P78406 RBPJP7-201ENST00000442803 1447 ntBASIC5.65□□□□□ -1.51
RAE1P78406 RBPJP5-201ENST00000449433 1447 ntBASIC5.65□□□□□ -1.51
RAE1P78406 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.65□□□□□ -1.51
RAE1P78406 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.64□□□□□ -1.51
RAE1P78406 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.64□□□□□ -1.51
RAE1P78406 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RAE1P78406 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RAE1P78406 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RAE1P78406 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.64□□□□□ -1.51
RAE1P78406 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RAE1P78406 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
RAE1P78406 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RAE1P78406 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
RAE1P78406 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RAE1P78406 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RAE1P78406 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RAE1P78406 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
RAE1P78406 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RAE1P78406 RN7SKP128-201ENST00000364270 303 ntBASIC5.64□□□□□ -1.51
RAE1P78406 AC007618.1-201ENST00000366455 732 ntBASIC5.64□□□□□ -1.51
RAE1P78406 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.64□□□□□ -1.51
RAE1P78406 SNORA51.9-201ENST00000384295 124 ntBASIC5.64□□□□□ -1.51
RAE1P78406 MIR130B-202ENST00000385018 82 ntBASIC5.64□□□□□ -1.51
RAE1P78406 ANAPC10P1-201ENST00000395991 556 ntBASIC5.64□□□□□ -1.51
RAE1P78406 RMRPP5-201ENST00000411156 267 ntBASIC5.64□□□□□ -1.51
RAE1P78406 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.64□□□□□ -1.51
RAE1P78406 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.64□□□□□ -1.51
RAE1P78406 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC5.64□□□□□ -1.51
RAE1P78406 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
RAE1P78406 AC241520.1-201ENST00000422654 1099 ntBASIC5.64□□□□□ -1.51
RAE1P78406 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.64□□□□□ -1.51
RAE1P78406 DSTNP5-201ENST00000427921 523 ntBASIC5.64□□□□□ -1.51
RAE1P78406 AL160175.1-201ENST00000428124 247 ntBASIC5.64□□□□□ -1.51
RAE1P78406 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC5.64□□□□□ -1.51
RAE1P78406 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC5.64□□□□□ -1.51
RAE1P78406 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.64□□□□□ -1.51
RAE1P78406 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RAE1P78406 AC092691.2-201ENST00000461787 803 ntBASIC5.64□□□□□ -1.51
RAE1P78406 CYCSP20-201ENST00000473154 315 ntBASIC5.64□□□□□ -1.51
RAE1P78406 OR5H3P-201ENST00000502817 919 ntBASIC5.64□□□□□ -1.51
RAE1P78406 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.64□□□□□ -1.51
RAE1P78406 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.64□□□□□ -1.51
RAE1P78406 AC090568.1-201ENST00000509499 856 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms