Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC4.69□□□□□ -1.66
LMO4P61968 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.69□□□□□ -1.66
LMO4P61968 DUTP1-201ENST00000493631 470 ntBASIC4.69□□□□□ -1.66
LMO4P61968 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.69□□□□□ -1.66
LMO4P61968 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.69□□□□□ -1.66
LMO4P61968 CCNHP1-201ENST00000513311 678 ntBASIC4.69□□□□□ -1.66
LMO4P61968 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC4.69□□□□□ -1.66
LMO4P61968 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.69□□□□□ -1.66
LMO4P61968 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC4.69□□□□□ -1.66
LMO4P61968 AC051619.2-201ENST00000559063 397 ntBASIC4.69□□□□□ -1.66
LMO4P61968 AL163952.1-202ENST00000569625 600 ntBASIC4.69□□□□□ -1.66
LMO4P61968 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.69□□□□□ -1.66
LMO4P61968 MIR1269B-201ENST00000580405 75 ntBASIC4.69□□□□□ -1.66
LMO4P61968 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC4.69□□□□□ -1.66
LMO4P61968 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.69□□□□□ -1.66
LMO4P61968 SUGT1P3-202ENST00000604259 383 ntBASIC4.69□□□□□ -1.66
LMO4P61968 PPATP2-201ENST00000605635 508 ntBASIC4.69□□□□□ -1.66
LMO4P61968 AC034229.4-201ENST00000607861 441 ntBASIC4.69□□□□□ -1.66
LMO4P61968 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
LMO4P61968 AC005840.5-201ENST00000619166 599 ntBASIC4.69□□□□□ -1.66
LMO4P61968 AC069234.4-201ENST00000621276 412 ntBASIC4.69□□□□□ -1.66
LMO4P61968 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.69□□□□□ -1.66
LMO4P61968 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
LMO4P61968 MAPK10-350ENST00000641777 965 ntBASIC4.69□□□□□ -1.66
LMO4P61968 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC4.69□□□□□ -1.66
LMO4P61968 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
LMO4P61968 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LMO4P61968 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LMO4P61968 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC4.69□□□□□ -1.66
LMO4P61968 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC4.69□□□□□ -1.66
LMO4P61968 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LMO4P61968 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC4.69□□□□□ -1.66
LMO4P61968 AC235565.1-201ENST00000456962 1325 ntBASIC4.69□□□□□ -1.66
LMO4P61968 AL022323.4-201ENST00000623980 13120 ntBASIC4.69□□□□□ -1.66
LMO4P61968 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
LMO4P61968 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LMO4P61968 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.69□□□□□ -1.66
LMO4P61968 AC025470.1-201ENST00000510053 2032 ntBASIC4.68□□□□□ -1.66
LMO4P61968 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LMO4P61968 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
LMO4P61968 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
LMO4P61968 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LMO4P61968 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LMO4P61968 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LMO4P61968 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC4.68□□□□□ -1.66
LMO4P61968 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
LMO4P61968 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LMO4P61968 AC016251.2-201ENST00000623393 3089 ntBASIC4.68□□□□□ -1.66
LMO4P61968 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LMO4P61968 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
LMO4P61968 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
LMO4P61968 RNA5SP234-201ENST00000363916 119 ntBASIC4.68□□□□□ -1.66
LMO4P61968 RN7SKP28-201ENST00000364770 305 ntBASIC4.68□□□□□ -1.66
LMO4P61968 RNU4-2-201ENST00000365668 141 ntBASIC4.68□□□□□ -1.66
LMO4P61968 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
LMO4P61968 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
LMO4P61968 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC4.68□□□□□ -1.66
LMO4P61968 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
LMO4P61968 RPS6P23-201ENST00000413224 722 ntBASIC4.68□□□□□ -1.66
LMO4P61968 RPS21P8-201ENST00000413365 247 ntBASIC4.68□□□□□ -1.66
LMO4P61968 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.68□□□□□ -1.66
LMO4P61968 Z93019.1-201ENST00000416450 973 ntBASIC4.68□□□□□ -1.66
LMO4P61968 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.68□□□□□ -1.66
LMO4P61968 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC4.68□□□□□ -1.66
LMO4P61968 HMGB1P32-201ENST00000425971 565 ntBASIC4.68□□□□□ -1.66
LMO4P61968 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.68□□□□□ -1.66
LMO4P61968 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.68□□□□□ -1.66
LMO4P61968 MTND6P5-201ENST00000448266 512 ntBASIC4.68□□□□□ -1.66
LMO4P61968 AL606490.1-201ENST00000452266 765 ntBASIC4.68□□□□□ -1.66
LMO4P61968 VDAC2P4-201ENST00000452925 711 ntBASIC4.68□□□□□ -1.66
LMO4P61968 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC4.68□□□□□ -1.66
LMO4P61968 SLC25A51P1-201ENST00000468432 871 ntBASIC4.68□□□□□ -1.66
LMO4P61968 COPS8P2-201ENST00000473228 627 ntBASIC4.68□□□□□ -1.66
LMO4P61968 RN7SL799P-201ENST00000475891 298 ntBASIC4.68□□□□□ -1.66
LMO4P61968 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.68□□□□□ -1.66
LMO4P61968 AC090638.1-201ENST00000498296 909 ntBASIC4.68□□□□□ -1.66
LMO4P61968 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.68□□□□□ -1.66
LMO4P61968 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.68□□□□□ -1.66
LMO4P61968 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.68□□□□□ -1.66
LMO4P61968 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.68□□□□□ -1.66
LMO4P61968 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC4.68□□□□□ -1.66
LMO4P61968 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.68□□□□□ -1.66
LMO4P61968 AC116158.1-201ENST00000560231 2129 ntBASIC4.68□□□□□ -1.66
LMO4P61968 AGGF1P7-201ENST00000562369 913 ntBASIC4.68□□□□□ -1.66
LMO4P61968 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.68□□□□□ -1.66
LMO4P61968 AP000919.1-201ENST00000582850 985 ntBASIC4.68□□□□□ -1.66
LMO4P61968 MIR4443-201ENST00000585052 53 ntBASIC4.68□□□□□ -1.66
LMO4P61968 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.68□□□□□ -1.66
LMO4P61968 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.68□□□□□ -1.66
LMO4P61968 AC245128.3-201ENST00000594721 748 ntBASIC4.68□□□□□ -1.66
LMO4P61968 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LMO4P61968 MIR6719-201ENST00000622428 87 ntBASIC4.68□□□□□ -1.66
LMO4P61968 AC104820.1-201ENST00000624183 307 ntBASIC4.68□□□□□ -1.66
LMO4P61968 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.68□□□□□ -1.66
LMO4P61968 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LMO4P61968 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LMO4P61968 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LMO4P61968 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
LMO4P61968 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LMO4P61968 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms