Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.25□□□□□ -1.57
LIM2P55344 AC018809.2-201ENST00000602436 3823 ntBASIC5.25□□□□□ -1.57
LIM2P55344 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.25□□□□□ -1.57
LIM2P55344 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.25□□□□□ -1.57
LIM2P55344 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.25□□□□□ -1.57
LIM2P55344 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.25□□□□□ -1.57
LIM2P55344 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LIM2P55344 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.25□□□□□ -1.57
LIM2P55344 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
LIM2P55344 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
LIM2P55344 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.25□□□□□ -1.57
LIM2P55344 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LIM2P55344 AC083899.1-201ENST00000454465 3819 ntBASIC5.25□□□□□ -1.57
LIM2P55344 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LIM2P55344 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.24□□□□□ -1.57
LIM2P55344 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.24□□□□□ -1.57
LIM2P55344 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LIM2P55344 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.24□□□□□ -1.57
LIM2P55344 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
LIM2P55344 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.24□□□□□ -1.57
LIM2P55344 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
LIM2P55344 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
LIM2P55344 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LIM2P55344 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.24□□□□□ -1.57
LIM2P55344 RN7SKP28-201ENST00000364770 305 ntBASIC5.24□□□□□ -1.57
LIM2P55344 RN7SKP6-201ENST00000364795 319 ntBASIC5.24□□□□□ -1.57
LIM2P55344 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
LIM2P55344 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.24□□□□□ -1.57
LIM2P55344 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LIM2P55344 SNORA70.6-201ENST00000383934 134 ntBASIC5.24□□□□□ -1.57
LIM2P55344 SNORA11.3-201ENST00000408471 128 ntBASIC5.24□□□□□ -1.57
LIM2P55344 RPSAP35-201ENST00000413753 818 ntBASIC5.24□□□□□ -1.57
LIM2P55344 AL133482.1-201ENST00000415988 498 ntBASIC5.24□□□□□ -1.57
LIM2P55344 RIMKLBP2-201ENST00000424737 654 ntBASIC5.24□□□□□ -1.57
LIM2P55344 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.24□□□□□ -1.57
LIM2P55344 AC013410.1-201ENST00000436223 1232 ntBASIC5.24□□□□□ -1.57
LIM2P55344 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.24□□□□□ -1.57
LIM2P55344 AC019185.1-201ENST00000442718 389 ntBASIC5.24□□□□□ -1.57
LIM2P55344 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.24□□□□□ -1.57
LIM2P55344 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.24□□□□□ -1.57
LIM2P55344 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.24□□□□□ -1.57
LIM2P55344 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.24□□□□□ -1.57
LIM2P55344 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.24□□□□□ -1.57
LIM2P55344 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC5.24□□□□□ -1.57
LIM2P55344 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LIM2P55344 PPP1R11P1-201ENST00000486095 376 ntBASIC5.24□□□□□ -1.57
LIM2P55344 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LIM2P55344 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.24□□□□□ -1.57
LIM2P55344 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.24□□□□□ -1.57
LIM2P55344 AC027544.3-201ENST00000535082 757 ntBASIC5.24□□□□□ -1.57
LIM2P55344 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LIM2P55344 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.24□□□□□ -1.57
LIM2P55344 AC022404.1-201ENST00000555320 273 ntBASIC5.24□□□□□ -1.57
LIM2P55344 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.24□□□□□ -1.57
LIM2P55344 AC020978.7-201ENST00000575953 1187 ntBASIC5.24□□□□□ -1.57
LIM2P55344 MIR1273E-201ENST00000581165 102 ntBASIC5.24□□□□□ -1.57
LIM2P55344 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
LIM2P55344 AC012616.1-201ENST00000600294 197 ntBASIC5.24□□□□□ -1.57
LIM2P55344 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LIM2P55344 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.24□□□□□ -1.57
LIM2P55344 SNORA11.6-201ENST00000619030 128 ntBASIC5.24□□□□□ -1.57
LIM2P55344 AL691477.1-201ENST00000624398 162 ntBASIC5.24□□□□□ -1.57
LIM2P55344 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.24□□□□□ -1.57
LIM2P55344 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.24□□□□□ -1.57
LIM2P55344 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
LIM2P55344 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.24□□□□□ -1.57
LIM2P55344 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
LIM2P55344 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LIM2P55344 Z95114.1-201ENST00000624264 14574 ntBASIC5.24□□□□□ -1.57
LIM2P55344 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
LIM2P55344 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
LIM2P55344 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.24□□□□□ -1.57
LIM2P55344 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.24□□□□□ -1.57
LIM2P55344 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.24□□□□□ -1.57
LIM2P55344 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LIM2P55344 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LIM2P55344 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
LIM2P55344 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
LIM2P55344 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LIM2P55344 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.23□□□□□ -1.57
LIM2P55344 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.23□□□□□ -1.57
LIM2P55344 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.23□□□□□ -1.57
LIM2P55344 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
LIM2P55344 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
LIM2P55344 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.23□□□□□ -1.57
LIM2P55344 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LIM2P55344 RNU4-2-201ENST00000365668 141 ntBASIC5.23□□□□□ -1.57
LIM2P55344 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
LIM2P55344 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.23□□□□□ -1.57
LIM2P55344 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LIM2P55344 RN7SKP293-201ENST00000411389 296 ntBASIC5.23□□□□□ -1.57
LIM2P55344 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LIM2P55344 AC244033.1-201ENST00000426826 870 ntBASIC5.23□□□□□ -1.57
LIM2P55344 RPL7P56-201ENST00000429441 717 ntBASIC5.23□□□□□ -1.57
LIM2P55344 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.23□□□□□ -1.57
LIM2P55344 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.23□□□□□ -1.57
LIM2P55344 AC092106.1-201ENST00000444291 373 ntBASIC5.23□□□□□ -1.57
LIM2P55344 IGBP1P3-201ENST00000447449 1000 ntBASIC5.23□□□□□ -1.57
LIM2P55344 AZGP1P2-201ENST00000454506 345 ntBASIC5.23□□□□□ -1.57
LIM2P55344 RN7SL188P-201ENST00000469842 285 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms