Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
MRE11P49959 GTF2IP4-201ENST00000453092 2054 ntBASIC7.07□□□□□ -1.28
MRE11P49959 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC7.07□□□□□ -1.28
MRE11P49959 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
MRE11P49959 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
MRE11P49959 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC7.07□□□□□ -1.28
MRE11P49959 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC7.07□□□□□ -1.28
MRE11P49959 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
MRE11P49959 MTND4P13-201ENST00000402078 1023 ntBASIC7.07□□□□□ -1.28
MRE11P49959 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
MRE11P49959 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC7.07□□□□□ -1.28
MRE11P49959 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC7.07□□□□□ -1.28
MRE11P49959 AC007394.1-201ENST00000421941 531 ntBASIC7.07□□□□□ -1.28
MRE11P49959 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC7.07□□□□□ -1.28
MRE11P49959 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC7.07□□□□□ -1.28
MRE11P49959 MRPL50P1-201ENST00000431951 384 ntBASIC7.07□□□□□ -1.28
MRE11P49959 AC073072.2-201ENST00000447425 348 ntBASIC7.07□□□□□ -1.28
MRE11P49959 COX4I1P2-201ENST00000447446 547 ntBASIC7.07□□□□□ -1.28
MRE11P49959 AC105420.1-201ENST00000504389 582 ntBASIC7.07□□□□□ -1.28
MRE11P49959 AC131392.1-201ENST00000506490 633 ntBASIC7.07□□□□□ -1.28
MRE11P49959 AC090958.1-201ENST00000511122 351 ntBASIC7.07□□□□□ -1.28
MRE11P49959 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
MRE11P49959 OR7E13P-201ENST00000526052 910 ntBASIC7.07□□□□□ -1.28
MRE11P49959 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC7.07□□□□□ -1.28
MRE11P49959 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC7.07□□□□□ -1.28
MRE11P49959 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
MRE11P49959 AC079148.1-201ENST00000565944 819 ntBASIC7.07□□□□□ -1.28
MRE11P49959 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC7.07□□□□□ -1.28
MRE11P49959 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC7.07□□□□□ -1.28
MRE11P49959 AC020916.2-201ENST00000591242 360 ntBASIC7.07□□□□□ -1.28
MRE11P49959 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC7.07□□□□□ -1.28
MRE11P49959 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC7.07□□□□□ -1.28
MRE11P49959 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
MRE11P49959 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
MRE11P49959 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
MRE11P49959 RPL31P11-201ENST00000426558 1558 ntBASIC7.07□□□□□ -1.28
MRE11P49959 BCORP1-203ENST00000513194 5093 ntBASIC7.07□□□□□ -1.28
MRE11P49959 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC7.07□□□□□ -1.28
MRE11P49959 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
MRE11P49959 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
MRE11P49959 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
MRE11P49959 EEF1A1P30-201ENST00000429708 1315 ntBASIC7.06□□□□□ -1.28
MRE11P49959 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC7.06□□□□□ -1.28
MRE11P49959 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
MRE11P49959 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
MRE11P49959 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.06□□□□□ -1.28
MRE11P49959 RNU6-1000P-201ENST00000391066 106 ntBASIC7.06□□□□□ -1.28
MRE11P49959 AL929472.1-201ENST00000417484 429 ntBASIC7.06□□□□□ -1.28
MRE11P49959 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC7.06□□□□□ -1.28
MRE11P49959 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC7.06□□□□□ -1.28
MRE11P49959 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC7.06□□□□□ -1.28
MRE11P49959 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC7.06□□□□□ -1.28
MRE11P49959 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC7.06□□□□□ -1.28
MRE11P49959 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC7.06□□□□□ -1.28
MRE11P49959 MED28P3-201ENST00000444288 531 ntBASIC7.06□□□□□ -1.28
MRE11P49959 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC7.06□□□□□ -1.28
MRE11P49959 AL162739.1-201ENST00000450606 307 ntBASIC7.06□□□□□ -1.28
MRE11P49959 MTCO2P6-201ENST00000463134 685 ntBASIC7.06□□□□□ -1.28
MRE11P49959 RN7SL515P-201ENST00000463999 297 ntBASIC7.06□□□□□ -1.28
MRE11P49959 RN7SL390P-201ENST00000470634 284 ntBASIC7.06□□□□□ -1.28
MRE11P49959 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC7.06□□□□□ -1.28
MRE11P49959 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC7.06□□□□□ -1.28
MRE11P49959 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC7.06□□□□□ -1.28
MRE11P49959 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC7.06□□□□□ -1.28
MRE11P49959 SCARNA5-201ENST00000516201 276 ntBASIC7.06□□□□□ -1.28
MRE11P49959 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC7.06□□□□□ -1.28
MRE11P49959 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC7.06□□□□□ -1.28
MRE11P49959 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC7.06□□□□□ -1.28
MRE11P49959 OR4A43P-201ENST00000532938 908 ntBASIC7.06□□□□□ -1.28
MRE11P49959 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC7.06□□□□□ -1.28
MRE11P49959 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC7.06□□□□□ -1.28
MRE11P49959 AC084759.1-201ENST00000561168 290 ntBASIC7.06□□□□□ -1.28
MRE11P49959 ZNF322P1-201ENST00000568013 1209 ntBASIC7.06□□□□□ -1.28
MRE11P49959 RN7SL208P-201ENST00000577964 296 ntBASIC7.06□□□□□ -1.28
MRE11P49959 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC7.06□□□□□ -1.28
MRE11P49959 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC7.06□□□□□ -1.28
MRE11P49959 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC7.06□□□□□ -1.28
MRE11P49959 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC7.06□□□□□ -1.28
MRE11P49959 AC087468.1-201ENST00000604365 630 ntBASIC7.06□□□□□ -1.28
MRE11P49959 AL135999.3-201ENST00000610501 812 ntBASIC7.06□□□□□ -1.28
MRE11P49959 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC7.06□□□□□ -1.28
MRE11P49959 AC005618.4-201ENST00000625053 554 ntBASIC7.06□□□□□ -1.28
MRE11P49959 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC7.06□□□□□ -1.28
MRE11P49959 AC073488.9-201ENST00000631601 754 ntBASIC7.06□□□□□ -1.28
MRE11P49959 MTND2P41-201ENST00000637599 773 ntBASIC7.06□□□□□ -1.28
MRE11P49959 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
MRE11P49959 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
MRE11P49959 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC7.06□□□□□ -1.28
MRE11P49959 GDA-209ENST00000545168 5362 ntTSL 2 BASIC7.06□□□□□ -1.28
MRE11P49959 AL591135.1-201ENST00000401578 5914 ntBASIC7.06□□□□□ -1.28
MRE11P49959 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
MRE11P49959 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
MRE11P49959 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC7.05□□□□□ -1.28
MRE11P49959 BX284613.1-201ENST00000452221 1641 ntBASIC7.05□□□□□ -1.28
MRE11P49959 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC7.05□□□□□ -1.28
MRE11P49959 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC7.05□□□□□ -1.28
MRE11P49959 AC009962.1-201ENST00000567327 3813 ntBASIC7.05□□□□□ -1.28
MRE11P49959 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
MRE11P49959 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
MRE11P49959 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms