Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.07□□□□□ -1.44
SSR1P43307 EIF4A2P5-201ENST00000529914 499 ntBASIC6.07□□□□□ -1.44
SSR1P43307 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SSR1P43307 AC090022.1-201ENST00000546569 311 ntBASIC6.07□□□□□ -1.44
SSR1P43307 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.07□□□□□ -1.44
SSR1P43307 MIR4472-2-201ENST00000582069 67 ntBASIC6.07□□□□□ -1.44
SSR1P43307 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.07□□□□□ -1.44
SSR1P43307 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.07□□□□□ -1.44
SSR1P43307 AC090236.2-201ENST00000587933 1101 ntBASIC6.07□□□□□ -1.44
SSR1P43307 AC096553.1-201ENST00000605169 829 ntBASIC6.07□□□□□ -1.44
SSR1P43307 AL353729.2-201ENST00000605859 1249 ntBASIC6.07□□□□□ -1.44
SSR1P43307 AC108673.3-201ENST00000609183 335 ntBASIC6.07□□□□□ -1.44
SSR1P43307 MIR6809-201ENST00000612189 116 ntBASIC6.07□□□□□ -1.44
SSR1P43307 MIR6889-201ENST00000613185 59 ntBASIC6.07□□□□□ -1.44
SSR1P43307 AC073592.6-201ENST00000624271 415 ntBASIC6.07□□□□□ -1.44
SSR1P43307 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.07□□□□□ -1.44
SSR1P43307 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.07□□□□□ -1.44
SSR1P43307 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
SSR1P43307 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSR1P43307 THAP12P8-201ENST00000447914 2115 ntBASIC6.07□□□□□ -1.44
SSR1P43307 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.07□□□□□ -1.44
SSR1P43307 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSR1P43307 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SSR1P43307 SMG1P4-204ENST00000523028 4131 ntBASIC6.06□□□□□ -1.44
SSR1P43307 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
SSR1P43307 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC6.06□□□□□ -1.44
SSR1P43307 AC117409.1-201ENST00000470499 1310 ntBASIC6.06□□□□□ -1.44
SSR1P43307 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SSR1P43307 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSR1P43307 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.06□□□□□ -1.44
SSR1P43307 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSR1P43307 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SSR1P43307 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSR1P43307 RNU1-65P-201ENST00000363919 148 ntBASIC6.06□□□□□ -1.44
SSR1P43307 RN7SKP224-201ENST00000364140 325 ntBASIC6.06□□□□□ -1.44
SSR1P43307 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSR1P43307 AC087752.1-201ENST00000391360 558 ntBASIC6.06□□□□□ -1.44
SSR1P43307 GAPDHP15-201ENST00000398586 975 ntBASIC6.06□□□□□ -1.44
SSR1P43307 AL096711.1-201ENST00000404780 554 ntBASIC6.06□□□□□ -1.44
SSR1P43307 RN7SKP29-201ENST00000410957 272 ntBASIC6.06□□□□□ -1.44
SSR1P43307 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC6.06□□□□□ -1.44
SSR1P43307 AC019205.1-201ENST00000421830 730 ntBASIC6.06□□□□□ -1.44
SSR1P43307 VN1R21P-201ENST00000426703 765 ntBASIC6.06□□□□□ -1.44
SSR1P43307 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.06□□□□□ -1.44
SSR1P43307 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.06□□□□□ -1.44
SSR1P43307 OR7E116P-201ENST00000448529 957 ntBASIC6.06□□□□□ -1.44
SSR1P43307 PPIAP27-201ENST00000453800 265 ntBASIC6.06□□□□□ -1.44
SSR1P43307 GEMIN2P1-201ENST00000454246 752 ntBASIC6.06□□□□□ -1.44
SSR1P43307 YRDCP3-201ENST00000456507 480 ntBASIC6.06□□□□□ -1.44
SSR1P43307 CST12P-201ENST00000457644 362 ntBASIC6.06□□□□□ -1.44
SSR1P43307 PDCL3P4-201ENST00000489621 720 ntBASIC6.06□□□□□ -1.44
SSR1P43307 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SSR1P43307 AC111000.6-201ENST00000514471 709 ntBASIC6.06□□□□□ -1.44
SSR1P43307 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.06□□□□□ -1.44
SSR1P43307 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC6.06□□□□□ -1.44
SSR1P43307 AC011853.1-201ENST00000518911 454 ntBASIC6.06□□□□□ -1.44
SSR1P43307 PCNAP4-201ENST00000532690 730 ntBASIC6.06□□□□□ -1.44
SSR1P43307 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.06□□□□□ -1.44
SSR1P43307 AC126615.2-201ENST00000553003 515 ntBASIC6.06□□□□□ -1.44
SSR1P43307 AC007956.1-201ENST00000555623 542 ntBASIC6.06□□□□□ -1.44
SSR1P43307 HIRAP1-201ENST00000605318 787 ntBASIC6.06□□□□□ -1.44
SSR1P43307 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.06□□□□□ -1.44
SSR1P43307 AP001437.1-201ENST00000608783 456 ntBASIC6.06□□□□□ -1.44
SSR1P43307 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.06□□□□□ -1.44
SSR1P43307 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SSR1P43307 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SSR1P43307 AL158152.1-201ENST00000602652 1435 ntBASIC6.06□□□□□ -1.44
SSR1P43307 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSR1P43307 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SSR1P43307 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.06□□□□□ -1.44
SSR1P43307 AC091305.2-201ENST00000624049 1576 ntBASIC6.06□□□□□ -1.44
SSR1P43307 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SSR1P43307 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.05□□□□□ -1.44
SSR1P43307 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SSR1P43307 AC027088.4-201ENST00000611559 1947 ntBASIC6.05□□□□□ -1.44
SSR1P43307 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
SSR1P43307 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
SSR1P43307 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.05□□□□□ -1.44
SSR1P43307 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
SSR1P43307 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SSR1P43307 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SSR1P43307 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SSR1P43307 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
SSR1P43307 AL158827.1-201ENST00000416300 391 ntBASIC6.05□□□□□ -1.44
SSR1P43307 AC013470.3-201ENST00000420252 1194 ntBASIC6.05□□□□□ -1.44
SSR1P43307 PTP4A1P1-201ENST00000420539 515 ntBASIC6.05□□□□□ -1.44
SSR1P43307 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.05□□□□□ -1.44
SSR1P43307 AC242426.1-201ENST00000435270 960 ntBASIC6.05□□□□□ -1.44
SSR1P43307 CFL1P4-201ENST00000451536 498 ntBASIC6.05□□□□□ -1.44
SSR1P43307 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.05□□□□□ -1.44
SSR1P43307 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.05□□□□□ -1.44
SSR1P43307 DUTP1-201ENST00000493631 470 ntBASIC6.05□□□□□ -1.44
SSR1P43307 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SSR1P43307 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC6.05□□□□□ -1.44
SSR1P43307 IGLV3-30-201ENST00000524362 298 ntBASIC6.05□□□□□ -1.44
SSR1P43307 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.05□□□□□ -1.44
SSR1P43307 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.05□□□□□ -1.44
SSR1P43307 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.05□□□□□ -1.44
SSR1P43307 AC084824.2-201ENST00000548906 345 ntBASIC6.05□□□□□ -1.44
SSR1P43307 AC079905.1-201ENST00000549280 475 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms