Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DPA1P20036 AL138960.1-201ENST00000613838 513 ntBASIC5.78□□□□□ -1.48
HLA-DPA1P20036 AC090607.5-201ENST00000615692 224 ntBASIC5.78□□□□□ -1.48
HLA-DPA1P20036 AL035661.1-201ENST00000620459 1144 ntBASIC5.78□□□□□ -1.48
HLA-DPA1P20036 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DPA1P20036 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DPA1P20036 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.78□□□□□ -1.48
HLA-DPA1P20036 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DPA1P20036 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.78□□□□□ -1.48
HLA-DPA1P20036 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DPA1P20036 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DPA1P20036 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DPA1P20036 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.78□□□□□ -1.48
HLA-DPA1P20036 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.48
HLA-DPA1P20036 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
HLA-DPA1P20036 AP000432.2-201ENST00000624164 2048 ntBASIC5.77□□□□□ -1.49
HLA-DPA1P20036 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DPA1P20036 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.77□□□□□ -1.49
HLA-DPA1P20036 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
HLA-DPA1P20036 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.77□□□□□ -1.49
HLA-DPA1P20036 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.77□□□□□ -1.49
HLA-DPA1P20036 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.77□□□□□ -1.49
HLA-DPA1P20036 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DPA1P20036 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DPA1P20036 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.77□□□□□ -1.49
HLA-DPA1P20036 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
HLA-DPA1P20036 RPS3AP2-201ENST00000407190 754 ntBASIC5.77□□□□□ -1.49
HLA-DPA1P20036 CASKP1-201ENST00000412870 582 ntBASIC5.77□□□□□ -1.49
HLA-DPA1P20036 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DPA1P20036 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.77□□□□□ -1.49
HLA-DPA1P20036 AL022331.1-201ENST00000429025 477 ntBASIC5.77□□□□□ -1.49
HLA-DPA1P20036 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DPA1P20036 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.77□□□□□ -1.49
HLA-DPA1P20036 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.77□□□□□ -1.49
HLA-DPA1P20036 CYCSP51-201ENST00000443545 318 ntBASIC5.77□□□□□ -1.49
HLA-DPA1P20036 SEPT14P1-201ENST00000458703 648 ntBASIC5.77□□□□□ -1.49
HLA-DPA1P20036 AC084754.1-201ENST00000463466 464 ntBASIC5.77□□□□□ -1.49
HLA-DPA1P20036 AC011476.1-201ENST00000466725 307 ntBASIC5.77□□□□□ -1.49
HLA-DPA1P20036 AC022215.1-201ENST00000481770 362 ntBASIC5.77□□□□□ -1.49
HLA-DPA1P20036 RPL32P33-201ENST00000487023 394 ntBASIC5.77□□□□□ -1.49
HLA-DPA1P20036 AC073610.1-201ENST00000489971 396 ntBASIC5.77□□□□□ -1.49
HLA-DPA1P20036 AC009120.1-201ENST00000493458 473 ntBASIC5.77□□□□□ -1.49
HLA-DPA1P20036 DUTP1-201ENST00000493631 470 ntBASIC5.77□□□□□ -1.49
HLA-DPA1P20036 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.77□□□□□ -1.49
HLA-DPA1P20036 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.77□□□□□ -1.49
HLA-DPA1P20036 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.77□□□□□ -1.49
HLA-DPA1P20036 SNORA70.20-201ENST00000516848 126 ntBASIC5.77□□□□□ -1.49
HLA-DPA1P20036 AC021678.3-201ENST00000517893 476 ntBASIC5.77□□□□□ -1.49
HLA-DPA1P20036 TRIM51DP-201ENST00000529746 596 ntBASIC5.77□□□□□ -1.49
HLA-DPA1P20036 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.77□□□□□ -1.49
HLA-DPA1P20036 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.77□□□□□ -1.49
HLA-DPA1P20036 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.77□□□□□ -1.49
HLA-DPA1P20036 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.77□□□□□ -1.49
HLA-DPA1P20036 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.77□□□□□ -1.49
HLA-DPA1P20036 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.77□□□□□ -1.49
HLA-DPA1P20036 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.77□□□□□ -1.49
HLA-DPA1P20036 MIR4420-201ENST00000583944 77 ntBASIC5.77□□□□□ -1.49
HLA-DPA1P20036 AC073575.2-201ENST00000614212 627 ntBASIC5.77□□□□□ -1.49
HLA-DPA1P20036 AC000095.2-202ENST00000637415 154 ntBASIC5.77□□□□□ -1.49
HLA-DPA1P20036 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
HLA-DPA1P20036 AC107021.2-201ENST00000567714 2095 ntBASIC5.77□□□□□ -1.49
HLA-DPA1P20036 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DPA1P20036 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DPA1P20036 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HLA-DPA1P20036 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HLA-DPA1P20036 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
HLA-DPA1P20036 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HLA-DPA1P20036 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.76□□□□□ -1.49
HLA-DPA1P20036 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
HLA-DPA1P20036 AL159987.1-201ENST00000347911 293 ntBASIC5.76□□□□□ -1.49
HLA-DPA1P20036 RNA5SP510-201ENST00000364697 99 ntBASIC5.76□□□□□ -1.49
HLA-DPA1P20036 LYPLA1P3-201ENST00000402650 695 ntBASIC5.76□□□□□ -1.49
HLA-DPA1P20036 SLC20A1P1-201ENST00000413906 956 ntBASIC5.76□□□□□ -1.49
HLA-DPA1P20036 RNF10P1-201ENST00000418589 369 ntBASIC5.76□□□□□ -1.49
HLA-DPA1P20036 SETP10-201ENST00000424368 814 ntBASIC5.76□□□□□ -1.49
HLA-DPA1P20036 RPS29P14-201ENST00000431518 171 ntBASIC5.76□□□□□ -1.49
HLA-DPA1P20036 Z84478.1-201ENST00000438230 1219 ntBASIC5.76□□□□□ -1.49
HLA-DPA1P20036 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.76□□□□□ -1.49
HLA-DPA1P20036 AP006222.1-205ENST00000450734 457 ntBASIC5.76□□□□□ -1.49
HLA-DPA1P20036 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.76□□□□□ -1.49
HLA-DPA1P20036 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.76□□□□□ -1.49
HLA-DPA1P20036 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.76□□□□□ -1.49
HLA-DPA1P20036 AC105918.1-201ENST00000474399 838 ntBASIC5.76□□□□□ -1.49
HLA-DPA1P20036 RPL12P24-201ENST00000474907 486 ntBASIC5.76□□□□□ -1.49
HLA-DPA1P20036 OR11I1P-201ENST00000486033 954 ntBASIC5.76□□□□□ -1.49
HLA-DPA1P20036 OR7E157P-201ENST00000494376 911 ntBASIC5.76□□□□□ -1.49
HLA-DPA1P20036 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.76□□□□□ -1.49
HLA-DPA1P20036 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
HLA-DPA1P20036 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.76□□□□□ -1.49
HLA-DPA1P20036 AP001284.1-201ENST00000528393 2118 ntBASIC5.76□□□□□ -1.49
HLA-DPA1P20036 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
HLA-DPA1P20036 AC139697.1-201ENST00000548429 745 ntBASIC5.76□□□□□ -1.49
HLA-DPA1P20036 AC084824.2-201ENST00000548906 345 ntBASIC5.76□□□□□ -1.49
HLA-DPA1P20036 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.76□□□□□ -1.49
HLA-DPA1P20036 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.76□□□□□ -1.49
HLA-DPA1P20036 MTND2P13-201ENST00000577438 1039 ntBASIC5.76□□□□□ -1.49
HLA-DPA1P20036 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.76□□□□□ -1.49
HLA-DPA1P20036 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.76□□□□□ -1.49
HLA-DPA1P20036 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.76□□□□□ -1.49
HLA-DPA1P20036 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms