Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
PCNAP12004 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCNAP12004 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
PCNAP12004 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC5.72□□□□□ -1.49
PCNAP12004 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCNAP12004 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCNAP12004 RNA5SP211-201ENST00000365516 117 ntBASIC5.72□□□□□ -1.49
PCNAP12004 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
PCNAP12004 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCNAP12004 CXADRP1-201ENST00000398098 1095 ntBASIC5.72□□□□□ -1.49
PCNAP12004 MIR1275-201ENST00000408770 80 ntBASIC5.72□□□□□ -1.49
PCNAP12004 SEPT7P8-201ENST00000413308 775 ntBASIC5.72□□□□□ -1.49
PCNAP12004 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.72□□□□□ -1.49
PCNAP12004 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.72□□□□□ -1.49
PCNAP12004 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.72□□□□□ -1.49
PCNAP12004 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.72□□□□□ -1.49
PCNAP12004 AL663074.2-201ENST00000440621 479 ntBASIC5.72□□□□□ -1.49
PCNAP12004 RPL6P30-201ENST00000443382 862 ntBASIC5.72□□□□□ -1.49
PCNAP12004 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.72□□□□□ -1.49
PCNAP12004 MTND6P5-201ENST00000448266 512 ntBASIC5.72□□□□□ -1.49
PCNAP12004 AL445466.1-201ENST00000448432 357 ntBASIC5.72□□□□□ -1.49
PCNAP12004 YRDCP3-201ENST00000456507 480 ntBASIC5.72□□□□□ -1.49
PCNAP12004 MTND2P30-201ENST00000456663 382 ntBASIC5.72□□□□□ -1.49
PCNAP12004 AL603882.1-201ENST00000463059 681 ntBASIC5.72□□□□□ -1.49
PCNAP12004 AC093719.1-201ENST00000480427 441 ntBASIC5.72□□□□□ -1.49
PCNAP12004 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.72□□□□□ -1.49
PCNAP12004 RPL9P15-201ENST00000491096 532 ntBASIC5.72□□□□□ -1.49
PCNAP12004 AC090543.1-201ENST00000492168 485 ntBASIC5.72□□□□□ -1.49
PCNAP12004 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCNAP12004 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.72□□□□□ -1.49
PCNAP12004 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
PCNAP12004 AK4P6-201ENST00000505168 528 ntBASIC5.72□□□□□ -1.49
PCNAP12004 TOMM22P4-201ENST00000511318 336 ntBASIC5.72□□□□□ -1.49
PCNAP12004 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.72□□□□□ -1.49
PCNAP12004 RN7SKP238-201ENST00000516483 249 ntBASIC5.72□□□□□ -1.49
PCNAP12004 RN7SKP183-201ENST00000517169 324 ntBASIC5.72□□□□□ -1.49
PCNAP12004 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.72□□□□□ -1.49
PCNAP12004 OR4V1P-201ENST00000525394 1140 ntBASIC5.72□□□□□ -1.49
PCNAP12004 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
PCNAP12004 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.72□□□□□ -1.49
PCNAP12004 AC008147.3-201ENST00000548666 354 ntBASIC5.72□□□□□ -1.49
PCNAP12004 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
PCNAP12004 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.72□□□□□ -1.49
PCNAP12004 AC068768.2-201ENST00000602352 343 ntBASIC5.72□□□□□ -1.49
PCNAP12004 AC124916.2-201ENST00000604416 224 ntBASIC5.72□□□□□ -1.49
PCNAP12004 CXADRP3-202ENST00000617265 1100 ntBASIC5.72□□□□□ -1.49
PCNAP12004 AC096708.4-201ENST00000620563 552 ntBASIC5.72□□□□□ -1.49
PCNAP12004 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCNAP12004 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.72□□□□□ -1.49
PCNAP12004 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.72□□□□□ -1.49
PCNAP12004 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCNAP12004 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCNAP12004 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.72□□□□□ -1.49
PCNAP12004 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
PCNAP12004 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
PCNAP12004 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.71□□□□□ -1.49
PCNAP12004 AC004076.2-201ENST00000620532 3323 ntBASIC5.71□□□□□ -1.49
PCNAP12004 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.49
PCNAP12004 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
PCNAP12004 AC004158.1-201ENST00000564508 4319 ntBASIC5.71□□□□□ -1.49
PCNAP12004 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.71□□□□□ -1.49
PCNAP12004 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.49
PCNAP12004 AC005224.3-201ENST00000584683 2140 ntBASIC5.71□□□□□ -1.5
PCNAP12004 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.71□□□□□ -1.5
PCNAP12004 TCP11X1-202ENST00000622971 1372 ntBASIC5.71□□□□□ -1.5
PCNAP12004 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PCNAP12004 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PCNAP12004 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PCNAP12004 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PCNAP12004 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PCNAP12004 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PCNAP12004 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PCNAP12004 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PCNAP12004 SNORA51.9-201ENST00000384295 124 ntBASIC5.71□□□□□ -1.5
PCNAP12004 MIR130B-202ENST00000385018 82 ntBASIC5.71□□□□□ -1.5
PCNAP12004 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
PCNAP12004 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.71□□□□□ -1.5
PCNAP12004 AC234781.4-201ENST00000419384 244 ntBASIC5.71□□□□□ -1.5
PCNAP12004 AC073464.3-201ENST00000422564 712 ntBASIC5.71□□□□□ -1.5
PCNAP12004 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.71□□□□□ -1.5
PCNAP12004 MTCO1P51-201ENST00000427672 1060 ntBASIC5.71□□□□□ -1.5
PCNAP12004 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.71□□□□□ -1.5
PCNAP12004 CLNS1AP1-201ENST00000435954 682 ntBASIC5.71□□□□□ -1.5
PCNAP12004 RPS7P3-201ENST00000443360 580 ntBASIC5.71□□□□□ -1.5
PCNAP12004 AC093166.3-201ENST00000448785 303 ntBASIC5.71□□□□□ -1.5
PCNAP12004 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PCNAP12004 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.71□□□□□ -1.5
PCNAP12004 OSTCP1-201ENST00000455507 450 ntBASIC5.71□□□□□ -1.5
PCNAP12004 AP002345.1-201ENST00000456493 928 ntBASIC5.71□□□□□ -1.5
PCNAP12004 AC009963.3-201ENST00000458090 486 ntBASIC5.71□□□□□ -1.5
PCNAP12004 AC079080.1-201ENST00000479841 822 ntBASIC5.71□□□□□ -1.5
PCNAP12004 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PCNAP12004 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.71□□□□□ -1.5
PCNAP12004 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.71□□□□□ -1.5
PCNAP12004 AC091874.2-201ENST00000505889 720 ntBASIC5.71□□□□□ -1.5
PCNAP12004 ST13P12-201ENST00000508958 1094 ntBASIC5.71□□□□□ -1.5
PCNAP12004 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.71□□□□□ -1.5
PCNAP12004 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.71□□□□□ -1.5
PCNAP12004 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.71□□□□□ -1.5
PCNAP12004 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms