Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.47□□□□□ -1.53
HOXC4P09017 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HOXC4P09017 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.47□□□□□ -1.53
HOXC4P09017 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.47□□□□□ -1.53
HOXC4P09017 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.47□□□□□ -1.53
HOXC4P09017 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
HOXC4P09017 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HOXC4P09017 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.47□□□□□ -1.53
HOXC4P09017 AL121886.1-201ENST00000358609 435 ntBASIC5.47□□□□□ -1.53
HOXC4P09017 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.47□□□□□ -1.53
HOXC4P09017 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
HOXC4P09017 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HOXC4P09017 SEPT7P2-202ENST00000398921 823 ntBASIC5.47□□□□□ -1.53
HOXC4P09017 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.47□□□□□ -1.53
HOXC4P09017 AC096921.1-201ENST00000411661 375 ntBASIC5.47□□□□□ -1.53
HOXC4P09017 AC092106.1-201ENST00000444291 373 ntBASIC5.47□□□□□ -1.53
HOXC4P09017 AC105399.1-202ENST00000447303 205 ntBASIC5.47□□□□□ -1.53
HOXC4P09017 RPL7P39-201ENST00000481157 744 ntBASIC5.47□□□□□ -1.53
HOXC4P09017 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.47□□□□□ -1.53
HOXC4P09017 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.47□□□□□ -1.53
HOXC4P09017 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.47□□□□□ -1.53
HOXC4P09017 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.47□□□□□ -1.53
HOXC4P09017 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.47□□□□□ -1.53
HOXC4P09017 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.47□□□□□ -1.53
HOXC4P09017 AP001267.4-201ENST00000602598 545 ntBASIC5.47□□□□□ -1.53
HOXC4P09017 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.47□□□□□ -1.53
HOXC4P09017 AC005840.5-201ENST00000619166 599 ntBASIC5.47□□□□□ -1.53
HOXC4P09017 AC004808.2-201ENST00000627965 773 ntBASIC5.47□□□□□ -1.53
HOXC4P09017 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.47□□□□□ -1.53
HOXC4P09017 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
HOXC4P09017 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HOXC4P09017 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HOXC4P09017 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.47□□□□□ -1.53
HOXC4P09017 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HOXC4P09017 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.47□□□□□ -1.53
HOXC4P09017 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
HOXC4P09017 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
HOXC4P09017 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
HOXC4P09017 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.46□□□□□ -1.53
HOXC4P09017 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
HOXC4P09017 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.46□□□□□ -1.53
HOXC4P09017 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.46□□□□□ -1.53
HOXC4P09017 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
HOXC4P09017 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
HOXC4P09017 AC139426.3-201ENST00000605648 2059 ntBASIC5.46□□□□□ -1.53
HOXC4P09017 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.46□□□□□ -1.54
HOXC4P09017 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.46□□□□□ -1.54
HOXC4P09017 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.46□□□□□ -1.54
HOXC4P09017 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.46□□□□□ -1.54
HOXC4P09017 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
HOXC4P09017 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.46□□□□□ -1.54
HOXC4P09017 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HOXC4P09017 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
HOXC4P09017 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HOXC4P09017 RN7SKP59-201ENST00000410520 314 ntBASIC5.46□□□□□ -1.54
HOXC4P09017 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.46□□□□□ -1.54
HOXC4P09017 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.46□□□□□ -1.54
HOXC4P09017 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.46□□□□□ -1.54
HOXC4P09017 RIMKLBP2-201ENST00000424737 654 ntBASIC5.46□□□□□ -1.54
HOXC4P09017 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.46□□□□□ -1.54
HOXC4P09017 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.46□□□□□ -1.54
HOXC4P09017 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HOXC4P09017 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.46□□□□□ -1.54
HOXC4P09017 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.46□□□□□ -1.54
HOXC4P09017 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.46□□□□□ -1.54
HOXC4P09017 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.46□□□□□ -1.54
HOXC4P09017 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.46□□□□□ -1.54
HOXC4P09017 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.46□□□□□ -1.54
HOXC4P09017 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.46□□□□□ -1.54
HOXC4P09017 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.46□□□□□ -1.54
HOXC4P09017 AC000068.2-201ENST00000608816 460 ntBASIC5.46□□□□□ -1.54
HOXC4P09017 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.46□□□□□ -1.54
HOXC4P09017 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HOXC4P09017 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.46□□□□□ -1.54
HOXC4P09017 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
HOXC4P09017 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
HOXC4P09017 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HOXC4P09017 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
HOXC4P09017 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HOXC4P09017 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HOXC4P09017 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.46□□□□□ -1.54
HOXC4P09017 AC083899.1-201ENST00000454465 3819 ntBASIC5.46□□□□□ -1.54
HOXC4P09017 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.45□□□□□ -1.54
HOXC4P09017 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HOXC4P09017 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HOXC4P09017 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.45□□□□□ -1.54
HOXC4P09017 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.45□□□□□ -1.54
HOXC4P09017 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
HOXC4P09017 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.45□□□□□ -1.54
HOXC4P09017 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.45□□□□□ -1.54
HOXC4P09017 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.45□□□□□ -1.54
HOXC4P09017 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HOXC4P09017 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HOXC4P09017 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
HOXC4P09017 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
HOXC4P09017 AP000534.2-201ENST00000412729 568 ntBASIC5.45□□□□□ -1.54
HOXC4P09017 SLC35E1P1-201ENST00000419313 864 ntBASIC5.45□□□□□ -1.54
HOXC4P09017 AC009506.2-201ENST00000420635 840 ntBASIC5.45□□□□□ -1.54
HOXC4P09017 AL355433.1-201ENST00000422804 300 ntBASIC5.45□□□□□ -1.54
HOXC4P09017 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms