Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 HMGB3P24-201ENST00000433260 622 ntBASIC5.78□□□□□ -1.48
MMP2P08253 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.78□□□□□ -1.48
MMP2P08253 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.78□□□□□ -1.48
MMP2P08253 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.78□□□□□ -1.48
MMP2P08253 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
MMP2P08253 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.78□□□□□ -1.48
MMP2P08253 AC084754.1-201ENST00000463466 464 ntBASIC5.78□□□□□ -1.48
MMP2P08253 AC094085.1-201ENST00000468914 584 ntBASIC5.78□□□□□ -1.48
MMP2P08253 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.78□□□□□ -1.48
MMP2P08253 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.78□□□□□ -1.48
MMP2P08253 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.78□□□□□ -1.48
MMP2P08253 SNORA70.20-201ENST00000516848 126 ntBASIC5.78□□□□□ -1.48
MMP2P08253 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
MMP2P08253 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.78□□□□□ -1.48
MMP2P08253 AP004609.2-201ENST00000532177 190 ntBASIC5.78□□□□□ -1.48
MMP2P08253 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.78□□□□□ -1.48
MMP2P08253 AC139697.1-201ENST00000548429 745 ntBASIC5.78□□□□□ -1.48
MMP2P08253 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
MMP2P08253 AL158152.1-201ENST00000602652 1435 ntBASIC5.78□□□□□ -1.48
MMP2P08253 NANOGP3-201ENST00000605855 286 ntBASIC5.78□□□□□ -1.48
MMP2P08253 AC084036.1-201ENST00000609190 508 ntBASIC5.78□□□□□ -1.48
MMP2P08253 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.78□□□□□ -1.48
MMP2P08253 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
MMP2P08253 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
MMP2P08253 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
MMP2P08253 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.78□□□□□ -1.48
MMP2P08253 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.78□□□□□ -1.48
MMP2P08253 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
MMP2P08253 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.78□□□□□ -1.48
MMP2P08253 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
MMP2P08253 AC007159.1-201ENST00000566529 4706 ntBASIC5.78□□□□□ -1.48
MMP2P08253 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
MMP2P08253 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
MMP2P08253 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.78□□□□□ -1.48
MMP2P08253 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.78□□□□□ -1.48
MMP2P08253 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.77□□□□□ -1.48
MMP2P08253 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
MMP2P08253 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
MMP2P08253 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
MMP2P08253 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
MMP2P08253 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
MMP2P08253 AC138907.8-201ENST00000623981 2256 ntBASIC5.77□□□□□ -1.49
MMP2P08253 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.77□□□□□ -1.49
MMP2P08253 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
MMP2P08253 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
MMP2P08253 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
MMP2P08253 FUNDC2P3-201ENST00000334716 533 ntBASIC5.77□□□□□ -1.49
MMP2P08253 MIR375-201ENST00000362103 64 ntBASIC5.77□□□□□ -1.49
MMP2P08253 RNA5SP394-201ENST00000364216 119 ntBASIC5.77□□□□□ -1.49
MMP2P08253 RNA5SP30-201ENST00000365552 115 ntBASIC5.77□□□□□ -1.49
MMP2P08253 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.77□□□□□ -1.49
MMP2P08253 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.77□□□□□ -1.49
MMP2P08253 RPS3P2-201ENST00000421346 701 ntBASIC5.77□□□□□ -1.49
MMP2P08253 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC5.77□□□□□ -1.49
MMP2P08253 AC017019.1-201ENST00000426129 261 ntBASIC5.77□□□□□ -1.49
MMP2P08253 AL022331.1-201ENST00000429025 477 ntBASIC5.77□□□□□ -1.49
MMP2P08253 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.77□□□□□ -1.49
MMP2P08253 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.77□□□□□ -1.49
MMP2P08253 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.77□□□□□ -1.49
MMP2P08253 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.77□□□□□ -1.49
MMP2P08253 SNORA26.10-201ENST00000516427 141 ntBASIC5.77□□□□□ -1.49
MMP2P08253 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.77□□□□□ -1.49
MMP2P08253 MRPS16P1-201ENST00000523462 412 ntBASIC5.77□□□□□ -1.49
MMP2P08253 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.77□□□□□ -1.49
MMP2P08253 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.77□□□□□ -1.49
MMP2P08253 LINC00557-201ENST00000563184 1279 ntBASIC5.77□□□□□ -1.49
MMP2P08253 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.77□□□□□ -1.49
MMP2P08253 DHFRP1-201ENST00000579682 559 ntBASIC5.77□□□□□ -1.49
MMP2P08253 AC093388.1-201ENST00000609166 430 ntBASIC5.77□□□□□ -1.49
MMP2P08253 MIR6778-201ENST00000617912 73 ntBASIC5.77□□□□□ -1.49
MMP2P08253 AL138960.2-201ENST00000625145 535 ntBASIC5.77□□□□□ -1.49
MMP2P08253 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.77□□□□□ -1.49
MMP2P08253 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.77□□□□□ -1.49
MMP2P08253 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
MMP2P08253 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
MMP2P08253 OR13C1P-202ENST00000641378 2919 ntBASIC5.77□□□□□ -1.49
MMP2P08253 MRE11P1-201ENST00000464884 2127 ntBASIC5.77□□□□□ -1.49
MMP2P08253 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
MMP2P08253 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
MMP2P08253 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
MMP2P08253 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
MMP2P08253 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
MMP2P08253 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
MMP2P08253 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
MMP2P08253 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
MMP2P08253 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
MMP2P08253 AC106872.5-201ENST00000508856 1416 ntBASIC5.76□□□□□ -1.49
MMP2P08253 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
MMP2P08253 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.76□□□□□ -1.49
MMP2P08253 OR56A4-201ENST00000330728 1209 ntBASIC5.76□□□□□ -1.49
MMP2P08253 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
MMP2P08253 RNU6-697P-201ENST00000363348 107 ntBASIC5.76□□□□□ -1.49
MMP2P08253 RN7SKP292-201ENST00000365522 317 ntBASIC5.76□□□□□ -1.49
MMP2P08253 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
MMP2P08253 RPL11P3-201ENST00000395256 523 ntBASIC5.76□□□□□ -1.49
MMP2P08253 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.76□□□□□ -1.49
MMP2P08253 HMGB1P20-201ENST00000402555 677 ntBASIC5.76□□□□□ -1.49
MMP2P08253 RPS3AP2-201ENST00000407190 754 ntBASIC5.76□□□□□ -1.49
MMP2P08253 MIR1282-201ENST00000408865 101 ntBASIC5.76□□□□□ -1.49
MMP2P08253 AC098592.2-201ENST00000413158 265 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms