Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 AC114774.1-201ENST00000507410 1770 ntBASIC5.62□□□□□ -1.51
CAPN1P07384 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CAPN1P07384 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.62□□□□□ -1.51
CAPN1P07384 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CAPN1P07384 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CAPN1P07384 AC016739.1-201ENST00000405359 345 ntBASIC5.62□□□□□ -1.51
CAPN1P07384 RPS3AP2-201ENST00000407190 754 ntBASIC5.62□□□□□ -1.51
CAPN1P07384 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CAPN1P07384 RN7SKP229-201ENST00000410465 302 ntBASIC5.62□□□□□ -1.51
CAPN1P07384 AC093155.2-201ENST00000420734 937 ntBASIC5.62□□□□□ -1.51
CAPN1P07384 AC064862.4-201ENST00000442180 334 ntBASIC5.62□□□□□ -1.51
CAPN1P07384 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.62□□□□□ -1.51
CAPN1P07384 AC023141.9-201ENST00000458734 412 ntBASIC5.62□□□□□ -1.51
CAPN1P07384 MORF4L2P1-201ENST00000503761 858 ntBASIC5.62□□□□□ -1.51
CAPN1P07384 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.62□□□□□ -1.51
CAPN1P07384 AC105384.2-201ENST00000508433 640 ntBASIC5.62□□□□□ -1.51
CAPN1P07384 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.62□□□□□ -1.51
CAPN1P07384 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CAPN1P07384 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.62□□□□□ -1.51
CAPN1P07384 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.62□□□□□ -1.51
CAPN1P07384 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.62□□□□□ -1.51
CAPN1P07384 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.62□□□□□ -1.51
CAPN1P07384 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
CAPN1P07384 HIRAP1-201ENST00000605318 787 ntBASIC5.62□□□□□ -1.51
CAPN1P07384 AC109309.2-201ENST00000612597 332 ntBASIC5.62□□□□□ -1.51
CAPN1P07384 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.62□□□□□ -1.51
CAPN1P07384 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.62□□□□□ -1.51
CAPN1P07384 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CAPN1P07384 CASC19-255ENST00000641733 1385 ntBASIC5.62□□□□□ -1.51
CAPN1P07384 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CAPN1P07384 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CAPN1P07384 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CAPN1P07384 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.62□□□□□ -1.51
CAPN1P07384 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CAPN1P07384 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CAPN1P07384 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CAPN1P07384 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.62□□□□□ -1.51
CAPN1P07384 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
CAPN1P07384 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CAPN1P07384 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CAPN1P07384 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CAPN1P07384 GVINP1-202ENST00000531871 7271 ntBASIC5.62□□□□□ -1.51
CAPN1P07384 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
CAPN1P07384 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.61□□□□□ -1.51
CAPN1P07384 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CAPN1P07384 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CAPN1P07384 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CAPN1P07384 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CAPN1P07384 RNA5SP242-201ENST00000364171 118 ntBASIC5.61□□□□□ -1.51
CAPN1P07384 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CAPN1P07384 NEPNP-201ENST00000404786 1371 ntBASIC5.61□□□□□ -1.51
CAPN1P07384 SNORA81-201ENST00000408493 178 ntBASIC5.61□□□□□ -1.51
CAPN1P07384 SMC4P1-201ENST00000414479 527 ntBASIC5.61□□□□□ -1.51
CAPN1P07384 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.61□□□□□ -1.51
CAPN1P07384 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.61□□□□□ -1.51
CAPN1P07384 VN1R21P-201ENST00000426703 765 ntBASIC5.61□□□□□ -1.51
CAPN1P07384 BX119321.1-201ENST00000428912 797 ntBASIC5.61□□□□□ -1.51
CAPN1P07384 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.61□□□□□ -1.51
CAPN1P07384 DEFA9P-201ENST00000433042 285 ntBASIC5.61□□□□□ -1.51
CAPN1P07384 NPM1P48-201ENST00000436002 853 ntBASIC5.61□□□□□ -1.51
CAPN1P07384 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.61□□□□□ -1.51
CAPN1P07384 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.61□□□□□ -1.51
CAPN1P07384 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.61□□□□□ -1.51
CAPN1P07384 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.61□□□□□ -1.51
CAPN1P07384 RPL36AP39-201ENST00000445859 318 ntBASIC5.61□□□□□ -1.51
CAPN1P07384 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.61□□□□□ -1.51
CAPN1P07384 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.61□□□□□ -1.51
CAPN1P07384 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.61□□□□□ -1.51
CAPN1P07384 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.61□□□□□ -1.51
CAPN1P07384 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.61□□□□□ -1.51
CAPN1P07384 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.61□□□□□ -1.51
CAPN1P07384 RN7SL717P-201ENST00000478343 297 ntBASIC5.61□□□□□ -1.51
CAPN1P07384 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CAPN1P07384 DEFB109A-201ENST00000482450 265 ntBASIC5.61□□□□□ -1.51
CAPN1P07384 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.61□□□□□ -1.51
CAPN1P07384 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.61□□□□□ -1.51
CAPN1P07384 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.61□□□□□ -1.51
CAPN1P07384 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.61□□□□□ -1.51
CAPN1P07384 HSPA8P14-201ENST00000552265 1805 ntBASIC5.61□□□□□ -1.51
CAPN1P07384 AC091078.2-201ENST00000557145 559 ntBASIC5.61□□□□□ -1.51
CAPN1P07384 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.61□□□□□ -1.51
CAPN1P07384 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.61□□□□□ -1.51
CAPN1P07384 AC010503.3-201ENST00000594355 540 ntBASIC5.61□□□□□ -1.51
CAPN1P07384 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.61□□□□□ -1.51
CAPN1P07384 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.61□□□□□ -1.51
CAPN1P07384 RN7SL787P-201ENST00000613000 284 ntBASIC5.61□□□□□ -1.51
CAPN1P07384 AL603750.1-201ENST00000624216 1717 ntBASIC5.61□□□□□ -1.51
CAPN1P07384 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CAPN1P07384 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
CAPN1P07384 AL355488.2-201ENST00000609909 2850 ntBASIC5.61□□□□□ -1.51
CAPN1P07384 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
CAPN1P07384 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.6□□□□□ -1.51
CAPN1P07384 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CAPN1P07384 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CAPN1P07384 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.6□□□□□ -1.51
CAPN1P07384 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CAPN1P07384 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
CAPN1P07384 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.6□□□□□ -1.51
CAPN1P07384 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CAPN1P07384 HCFC2P1-201ENST00000392864 1592 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 142.4 ms