Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HLA-DPB1P04440 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HLA-DPB1P04440 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HLA-DPB1P04440 RAB5CP1-201ENST00000395972 580 ntBASIC4.97□□□□□ -1.61
HLA-DPB1P04440 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC4.97□□□□□ -1.61
HLA-DPB1P04440 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.97□□□□□ -1.61
HLA-DPB1P04440 RPL7P56-201ENST00000429441 717 ntBASIC4.97□□□□□ -1.61
HLA-DPB1P04440 RPL7AP49-201ENST00000429522 581 ntBASIC4.97□□□□□ -1.61
HLA-DPB1P04440 AL591438.1-201ENST00000433508 581 ntBASIC4.97□□□□□ -1.61
HLA-DPB1P04440 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC4.97□□□□□ -1.61
HLA-DPB1P04440 GAS5-218ENST00000448718 565 ntTSL 2 BASIC4.97□□□□□ -1.61
HLA-DPB1P04440 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.97□□□□□ -1.61
HLA-DPB1P04440 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC4.97□□□□□ -1.61
HLA-DPB1P04440 AC016559.2-201ENST00000510759 359 ntBASIC4.97□□□□□ -1.61
HLA-DPB1P04440 RN7SKP70-201ENST00000516655 271 ntBASIC4.97□□□□□ -1.61
HLA-DPB1P04440 IGHVII-60-1-201ENST00000519079 256 ntBASIC4.97□□□□□ -1.61
HLA-DPB1P04440 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.97□□□□□ -1.61
HLA-DPB1P04440 AL356801.1-201ENST00000559320 294 ntBASIC4.97□□□□□ -1.61
HLA-DPB1P04440 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.97□□□□□ -1.61
HLA-DPB1P04440 AC092121.1-201ENST00000569452 202 ntBASIC4.97□□□□□ -1.61
HLA-DPB1P04440 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC4.97□□□□□ -1.61
HLA-DPB1P04440 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.97□□□□□ -1.61
HLA-DPB1P04440 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DPB1P04440 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC4.97□□□□□ -1.61
HLA-DPB1P04440 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.97□□□□□ -1.61
HLA-DPB1P04440 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
HLA-DPB1P04440 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DPB1P04440 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.97□□□□□ -1.61
HLA-DPB1P04440 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
HLA-DPB1P04440 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DPB1P04440 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DPB1P04440 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
HLA-DPB1P04440 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
HLA-DPB1P04440 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DPB1P04440 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
HLA-DPB1P04440 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
HLA-DPB1P04440 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
HLA-DPB1P04440 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC4.96□□□□□ -1.61
HLA-DPB1P04440 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
HLA-DPB1P04440 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DPB1P04440 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DPB1P04440 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DPB1P04440 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DPB1P04440 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
HLA-DPB1P04440 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DPB1P04440 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DPB1P04440 RNA5SP500-201ENST00000364486 119 ntBASIC4.96□□□□□ -1.62
HLA-DPB1P04440 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DPB1P04440 MIR1203-201ENST00000408812 85 ntBASIC4.96□□□□□ -1.62
HLA-DPB1P04440 NIFKP3-201ENST00000417799 865 ntBASIC4.96□□□□□ -1.62
HLA-DPB1P04440 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DPB1P04440 AL121878.1-201ENST00000418638 859 ntBASIC4.96□□□□□ -1.62
HLA-DPB1P04440 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.96□□□□□ -1.62
HLA-DPB1P04440 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.96□□□□□ -1.62
HLA-DPB1P04440 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC4.96□□□□□ -1.62
HLA-DPB1P04440 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC4.96□□□□□ -1.62
HLA-DPB1P04440 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC4.96□□□□□ -1.62
HLA-DPB1P04440 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC4.96□□□□□ -1.62
HLA-DPB1P04440 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC4.96□□□□□ -1.62
HLA-DPB1P04440 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC4.96□□□□□ -1.62
HLA-DPB1P04440 OR52E7P-201ENST00000452394 933 ntBASIC4.96□□□□□ -1.62
HLA-DPB1P04440 AZGP1P2-201ENST00000454506 345 ntBASIC4.96□□□□□ -1.62
HLA-DPB1P04440 NDUFA5P5-201ENST00000468361 342 ntBASIC4.96□□□□□ -1.62
HLA-DPB1P04440 UBFD1P1-201ENST00000473259 814 ntBASIC4.96□□□□□ -1.62
HLA-DPB1P04440 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DPB1P04440 AC069304.1-201ENST00000491593 704 ntBASIC4.96□□□□□ -1.62
HLA-DPB1P04440 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC4.96□□□□□ -1.62
HLA-DPB1P04440 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC4.96□□□□□ -1.62
HLA-DPB1P04440 AC091912.1-201ENST00000511351 248 ntBASIC4.96□□□□□ -1.62
HLA-DPB1P04440 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DPB1P04440 AC060775.1-201ENST00000518241 520 ntBASIC4.96□□□□□ -1.62
HLA-DPB1P04440 AC105036.1-201ENST00000566222 271 ntBASIC4.96□□□□□ -1.62
HLA-DPB1P04440 H3F3BP2-201ENST00000583907 357 ntBASIC4.96□□□□□ -1.62
HLA-DPB1P04440 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC4.96□□□□□ -1.62
HLA-DPB1P04440 AL049840.6-201ENST00000604583 345 ntBASIC4.96□□□□□ -1.62
HLA-DPB1P04440 AC090607.5-201ENST00000615692 224 ntBASIC4.96□□□□□ -1.62
HLA-DPB1P04440 AL359742.1-201ENST00000622497 540 ntBASIC4.96□□□□□ -1.62
HLA-DPB1P04440 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC4.96□□□□□ -1.62
HLA-DPB1P04440 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC4.96□□□□□ -1.62
HLA-DPB1P04440 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DPB1P04440 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DPB1P04440 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DPB1P04440 AC137056.2-201ENST00000624055 1958 ntBASIC4.96□□□□□ -1.62
HLA-DPB1P04440 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
HLA-DPB1P04440 AC022417.1-201ENST00000624768 1303 ntBASIC4.96□□□□□ -1.62
HLA-DPB1P04440 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.96□□□□□ -1.62
HLA-DPB1P04440 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DPB1P04440 ADAM5-202ENST00000399789 1942 ntBASIC4.95□□□□□ -1.62
HLA-DPB1P04440 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DPB1P04440 OR9K1P-202ENST00000641111 3217 ntBASIC4.95□□□□□ -1.62
HLA-DPB1P04440 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DPB1P04440 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.95□□□□□ -1.62
HLA-DPB1P04440 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DPB1P04440 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DPB1P04440 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DPB1P04440 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DPB1P04440 NEPNP-201ENST00000404786 1371 ntBASIC4.95□□□□□ -1.62
HLA-DPB1P04440 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC4.95□□□□□ -1.62
HLA-DPB1P04440 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DPB1P04440 OR7E25P-201ENST00000344844 931 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms