Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 AL627308.1-201ENST00000435693 821 ntBASIC7.12□□□□□ -1.27
COL3A1P02461 NOP56P2-201ENST00000447491 769 ntBASIC7.12□□□□□ -1.27
COL3A1P02461 AC026348.1-201ENST00000462549 1053 ntBASIC7.12□□□□□ -1.27
COL3A1P02461 AC079841.1-201ENST00000481228 950 ntBASIC7.12□□□□□ -1.27
COL3A1P02461 RN7SL814P-201ENST00000487715 300 ntBASIC7.12□□□□□ -1.27
COL3A1P02461 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC7.12□□□□□ -1.27
COL3A1P02461 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC7.12□□□□□ -1.27
COL3A1P02461 AC024940.3-201ENST00000538551 316 ntBASIC7.12□□□□□ -1.27
COL3A1P02461 AC092451.2-201ENST00000538746 658 ntBASIC7.12□□□□□ -1.27
COL3A1P02461 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC7.12□□□□□ -1.27
COL3A1P02461 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC7.12□□□□□ -1.27
COL3A1P02461 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC7.12□□□□□ -1.27
COL3A1P02461 AC009948.4-201ENST00000604692 675 ntBASIC7.12□□□□□ -1.27
COL3A1P02461 WBP1LP8-201ENST00000617401 327 ntBASIC7.12□□□□□ -1.27
COL3A1P02461 AC008147.4-201ENST00000617570 1204 ntBASIC7.12□□□□□ -1.27
COL3A1P02461 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL3A1P02461 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL3A1P02461 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
COL3A1P02461 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC7.12□□□□□ -1.27
COL3A1P02461 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC7.12□□□□□ -1.27
COL3A1P02461 AC144833.1-201ENST00000567953 4089 ntBASIC7.12□□□□□ -1.27
COL3A1P02461 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL3A1P02461 AC078880.4-201ENST00000617627 1749 ntBASIC7.12□□□□□ -1.27
COL3A1P02461 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.12□□□□□ -1.27
COL3A1P02461 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC7.12□□□□□ -1.27
COL3A1P02461 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC7.12□□□□□ -1.27
COL3A1P02461 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL3A1P02461 RN7SKP17-201ENST00000411242 351 ntBASIC7.11□□□□□ -1.27
COL3A1P02461 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC7.11□□□□□ -1.27
COL3A1P02461 AL158827.1-201ENST00000416300 391 ntBASIC7.11□□□□□ -1.27
COL3A1P02461 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC7.11□□□□□ -1.27
COL3A1P02461 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC7.11□□□□□ -1.27
COL3A1P02461 AL157385.1-201ENST00000446973 268 ntBASIC7.11□□□□□ -1.27
COL3A1P02461 AC092905.1-201ENST00000467527 949 ntBASIC7.11□□□□□ -1.27
COL3A1P02461 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC7.11□□□□□ -1.27
COL3A1P02461 AC110775.1-201ENST00000513721 462 ntBASIC7.11□□□□□ -1.27
COL3A1P02461 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC7.11□□□□□ -1.27
COL3A1P02461 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC7.11□□□□□ -1.27
COL3A1P02461 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC7.11□□□□□ -1.27
COL3A1P02461 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC7.11□□□□□ -1.27
COL3A1P02461 AC005520.3-201ENST00000602874 370 ntBASIC7.11□□□□□ -1.27
COL3A1P02461 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL3A1P02461 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL3A1P02461 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
COL3A1P02461 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
COL3A1P02461 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL3A1P02461 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL3A1P02461 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
COL3A1P02461 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL3A1P02461 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL3A1P02461 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL3A1P02461 AC011493.1-201ENST00000596753 1632 ntBASIC7.11□□□□□ -1.27
COL3A1P02461 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
COL3A1P02461 RNA5SP443-201ENST00000363083 132 ntBASIC7.11□□□□□ -1.27
COL3A1P02461 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC7.11□□□□□ -1.27
COL3A1P02461 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC7.11□□□□□ -1.27
COL3A1P02461 AC124944.2-201ENST00000429866 1242 ntBASIC7.11□□□□□ -1.27
COL3A1P02461 FAM96AP1-201ENST00000430879 482 ntBASIC7.11□□□□□ -1.27
COL3A1P02461 AL606490.1-201ENST00000452266 765 ntBASIC7.11□□□□□ -1.27
COL3A1P02461 OR2AO1P-201ENST00000476497 403 ntBASIC7.11□□□□□ -1.27
COL3A1P02461 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC7.11□□□□□ -1.27
COL3A1P02461 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC7.11□□□□□ -1.27
COL3A1P02461 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC7.11□□□□□ -1.27
COL3A1P02461 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC7.11□□□□□ -1.27
COL3A1P02461 AL445222.1-201ENST00000607259 628 ntBASIC7.11□□□□□ -1.27
COL3A1P02461 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC7.11□□□□□ -1.27
COL3A1P02461 LINC01739-205ENST00000641890 573 ntBASIC7.11□□□□□ -1.27
COL3A1P02461 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
COL3A1P02461 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL3A1P02461 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL3A1P02461 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL3A1P02461 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL3A1P02461 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL3A1P02461 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL3A1P02461 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
COL3A1P02461 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL3A1P02461 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL3A1P02461 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
COL3A1P02461 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC7.1□□□□□ -1.27
COL3A1P02461 HNRNPA3P4-201ENST00000427514 803 ntBASIC7.1□□□□□ -1.27
COL3A1P02461 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC7.1□□□□□ -1.27
COL3A1P02461 RHOT1P3-201ENST00000436571 331 ntBASIC7.1□□□□□ -1.27
COL3A1P02461 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC7.1□□□□□ -1.27
COL3A1P02461 AC093270.2-201ENST00000486157 792 ntBASIC7.1□□□□□ -1.27
COL3A1P02461 IMPA1P1-201ENST00000510718 842 ntBASIC7.1□□□□□ -1.27
COL3A1P02461 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC7.1□□□□□ -1.27
COL3A1P02461 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC7.1□□□□□ -1.27
COL3A1P02461 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
COL3A1P02461 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC7.1□□□□□ -1.27
COL3A1P02461 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC7.1□□□□□ -1.27
COL3A1P02461 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC7.1□□□□□ -1.27
COL3A1P02461 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC7.1□□□□□ -1.27
COL3A1P02461 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC7.1□□□□□ -1.27
COL3A1P02461 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC7.1□□□□□ -1.27
COL3A1P02461 AL138960.1-201ENST00000613838 513 ntBASIC7.1□□□□□ -1.27
COL3A1P02461 AP003400.3-201ENST00000624904 346 ntBASIC7.1□□□□□ -1.27
COL3A1P02461 AC015799.1-201ENST00000622996 3122 ntBASIC7.1□□□□□ -1.27
COL3A1P02461 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL3A1P02461 AC092747.4-201ENST00000620519 1861 ntBASIC7.09□□□□□ -1.27
COL3A1P02461 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms