Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.74□□□□□ -1.65
HLA-DQB1P01920 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DQB1P01920 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC4.74□□□□□ -1.65
HLA-DQB1P01920 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.74□□□□□ -1.65
HLA-DQB1P01920 MIR4311-201ENST00000580794 100 ntBASIC4.74□□□□□ -1.65
HLA-DQB1P01920 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC4.74□□□□□ -1.65
HLA-DQB1P01920 H3F3BP2-201ENST00000583907 357 ntBASIC4.74□□□□□ -1.65
HLA-DQB1P01920 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DQB1P01920 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
HLA-DQB1P01920 MIR6809-201ENST00000612189 116 ntBASIC4.74□□□□□ -1.65
HLA-DQB1P01920 AC090607.5-201ENST00000615692 224 ntBASIC4.74□□□□□ -1.65
HLA-DQB1P01920 AC005899.6-201ENST00000620729 297 ntBASIC4.74□□□□□ -1.65
HLA-DQB1P01920 5S_rRNA.29-201ENST00000641250 107 ntBASIC4.74□□□□□ -1.65
HLA-DQB1P01920 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DQB1P01920 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC4.74□□□□□ -1.65
HLA-DQB1P01920 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DQB1P01920 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DQB1P01920 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
HLA-DQB1P01920 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DQB1P01920 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DQB1P01920 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.74□□□□□ -1.65
HLA-DQB1P01920 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC4.74□□□□□ -1.65
HLA-DQB1P01920 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DQB1P01920 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
HLA-DQB1P01920 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
HLA-DQB1P01920 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DQB1P01920 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DQB1P01920 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
HLA-DQB1P01920 AL078595.2-201ENST00000605309 1780 ntBASIC4.73□□□□□ -1.65
HLA-DQB1P01920 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DQB1P01920 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
HLA-DQB1P01920 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
HLA-DQB1P01920 AL450345.1-202ENST00000605741 3881 ntBASIC4.73□□□□□ -1.65
HLA-DQB1P01920 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
HLA-DQB1P01920 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DQB1P01920 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
HLA-DQB1P01920 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DQB1P01920 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
HLA-DQB1P01920 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DQB1P01920 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DQB1P01920 AL159987.1-201ENST00000347911 293 ntBASIC4.73□□□□□ -1.65
HLA-DQB1P01920 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DQB1P01920 AL078599.1-201ENST00000402075 293 ntBASIC4.73□□□□□ -1.65
HLA-DQB1P01920 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
HLA-DQB1P01920 AL009179.1-201ENST00000406085 265 ntBASIC4.73□□□□□ -1.65
HLA-DQB1P01920 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DQB1P01920 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.73□□□□□ -1.65
HLA-DQB1P01920 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DQB1P01920 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DQB1P01920 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC4.73□□□□□ -1.65
HLA-DQB1P01920 NIFKP7-201ENST00000503365 834 ntBASIC4.73□□□□□ -1.65
HLA-DQB1P01920 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DQB1P01920 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DQB1P01920 GAPDHP71-201ENST00000511530 1003 ntBASIC4.73□□□□□ -1.65
HLA-DQB1P01920 RNU2-45P-201ENST00000516068 187 ntBASIC4.73□□□□□ -1.65
HLA-DQB1P01920 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC4.73□□□□□ -1.65
HLA-DQB1P01920 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DQB1P01920 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DQB1P01920 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DQB1P01920 AC002519.2-203ENST00000567043 837 ntBASIC4.73□□□□□ -1.65
HLA-DQB1P01920 AC011840.5-201ENST00000582125 771 ntBASIC4.73□□□□□ -1.65
HLA-DQB1P01920 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DQB1P01920 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DQB1P01920 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DQB1P01920 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DQB1P01920 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DQB1P01920 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DQB1P01920 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC4.73□□□□□ -1.65
HLA-DQB1P01920 AL139407.1-201ENST00000613826 1175 ntBASIC4.73□□□□□ -1.65
HLA-DQB1P01920 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DQB1P01920 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DQB1P01920 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DQB1P01920 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC4.73□□□□□ -1.65
HLA-DQB1P01920 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
HLA-DQB1P01920 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DQB1P01920 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DQB1P01920 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DQB1P01920 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
HLA-DQB1P01920 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DQB1P01920 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DQB1P01920 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.73□□□□□ -1.65
HLA-DQB1P01920 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
HLA-DQB1P01920 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DQB1P01920 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DQB1P01920 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DQB1P01920 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DQB1P01920 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DQB1P01920 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
HLA-DQB1P01920 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DQB1P01920 NPM1P38-201ENST00000403835 865 ntBASIC4.72□□□□□ -1.65
HLA-DQB1P01920 RN7SKP146-201ENST00000410242 334 ntBASIC4.72□□□□□ -1.65
HLA-DQB1P01920 NENFP1-201ENST00000419476 466 ntBASIC4.72□□□□□ -1.65
HLA-DQB1P01920 Z82198.3-201ENST00000421145 199 ntBASIC4.72□□□□□ -1.65
HLA-DQB1P01920 RPL36AP10-201ENST00000421785 322 ntBASIC4.72□□□□□ -1.65
HLA-DQB1P01920 AC007161.1-204ENST00000423039 460 ntBASIC4.72□□□□□ -1.65
HLA-DQB1P01920 NPM1P33-201ENST00000438918 872 ntBASIC4.72□□□□□ -1.65
HLA-DQB1P01920 RPL5P7-201ENST00000444235 813 ntBASIC4.72□□□□□ -1.65
HLA-DQB1P01920 CBX1P5-201ENST00000475330 559 ntBASIC4.72□□□□□ -1.65
HLA-DQB1P01920 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-DQB1P01920 AC113367.2-201ENST00000505749 160 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms