Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC069234.4-201ENST00000621276 412 ntBASIC5.29□□□□□ -1.56
ZIC3O60481 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.29□□□□□ -1.56
ZIC3O60481 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.29□□□□□ -1.56
ZIC3O60481 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ZIC3O60481 AL662795.2-201ENST00000624252 3706 ntBASIC5.29□□□□□ -1.56
ZIC3O60481 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.29□□□□□ -1.56
ZIC3O60481 AC106872.5-201ENST00000508856 1416 ntBASIC5.29□□□□□ -1.56
ZIC3O60481 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ZIC3O60481 AC073365.1-203ENST00000641055 1992 ntBASIC5.29□□□□□ -1.56
ZIC3O60481 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
ZIC3O60481 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.29□□□□□ -1.56
ZIC3O60481 AC005224.3-201ENST00000584683 2140 ntBASIC5.29□□□□□ -1.56
ZIC3O60481 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ZIC3O60481 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.29□□□□□ -1.56
ZIC3O60481 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ZIC3O60481 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.28□□□□□ -1.56
ZIC3O60481 AC068769.1-201ENST00000474767 2426 ntBASIC5.28□□□□□ -1.56
ZIC3O60481 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.28□□□□□ -1.56
ZIC3O60481 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.28□□□□□ -1.56
ZIC3O60481 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.28□□□□□ -1.56
ZIC3O60481 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
ZIC3O60481 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.28□□□□□ -1.56
ZIC3O60481 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.28□□□□□ -1.56
ZIC3O60481 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ZIC3O60481 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ZIC3O60481 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
ZIC3O60481 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ZIC3O60481 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
ZIC3O60481 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ZIC3O60481 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.28□□□□□ -1.56
ZIC3O60481 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ZIC3O60481 SNORA70.9-201ENST00000384370 135 ntBASIC5.28□□□□□ -1.56
ZIC3O60481 Z86062.1-201ENST00000406773 777 ntBASIC5.28□□□□□ -1.56
ZIC3O60481 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.28□□□□□ -1.56
ZIC3O60481 RANP4-201ENST00000413361 655 ntBASIC5.28□□□□□ -1.56
ZIC3O60481 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.28□□□□□ -1.56
ZIC3O60481 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
ZIC3O60481 AL389925.1-201ENST00000432257 728 ntBASIC5.28□□□□□ -1.56
ZIC3O60481 AC007563.3-201ENST00000433233 371 ntBASIC5.28□□□□□ -1.56
ZIC3O60481 AC245517.2-201ENST00000442890 346 ntBASIC5.28□□□□□ -1.56
ZIC3O60481 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.28□□□□□ -1.56
ZIC3O60481 AC006326.1-201ENST00000445465 787 ntBASIC5.28□□□□□ -1.56
ZIC3O60481 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC5.28□□□□□ -1.56
ZIC3O60481 AL445665.1-202ENST00000452436 324 ntBASIC5.28□□□□□ -1.56
ZIC3O60481 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
ZIC3O60481 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.28□□□□□ -1.56
ZIC3O60481 TRBV5-2-201ENST00000489095 273 ntBASIC5.28□□□□□ -1.56
ZIC3O60481 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.28□□□□□ -1.56
ZIC3O60481 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
ZIC3O60481 AC138409.2-202ENST00000507274 458 ntBASIC5.28□□□□□ -1.56
ZIC3O60481 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ZIC3O60481 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.28□□□□□ -1.56
ZIC3O60481 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.28□□□□□ -1.56
ZIC3O60481 HMGB1P46-201ENST00000520062 610 ntBASIC5.28□□□□□ -1.56
ZIC3O60481 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.28□□□□□ -1.56
ZIC3O60481 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.28□□□□□ -1.56
ZIC3O60481 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.28□□□□□ -1.56
ZIC3O60481 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.28□□□□□ -1.56
ZIC3O60481 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.28□□□□□ -1.56
ZIC3O60481 AL121839.1-201ENST00000556233 1185 ntBASIC5.28□□□□□ -1.56
ZIC3O60481 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.28□□□□□ -1.56
ZIC3O60481 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.28□□□□□ -1.56
ZIC3O60481 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.28□□□□□ -1.56
ZIC3O60481 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC5.28□□□□□ -1.56
ZIC3O60481 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.28□□□□□ -1.56
ZIC3O60481 RPAP2P1-201ENST00000603626 1168 ntBASIC5.28□□□□□ -1.56
ZIC3O60481 QTRT1P1-201ENST00000604344 1078 ntBASIC5.28□□□□□ -1.56
ZIC3O60481 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.28□□□□□ -1.56
ZIC3O60481 AC097504.2-201ENST00000608088 454 ntBASIC5.28□□□□□ -1.56
ZIC3O60481 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.28□□□□□ -1.56
ZIC3O60481 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.28□□□□□ -1.56
ZIC3O60481 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ZIC3O60481 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ZIC3O60481 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.28□□□□□ -1.56
ZIC3O60481 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ZIC3O60481 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ZIC3O60481 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ZIC3O60481 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
ZIC3O60481 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ZIC3O60481 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
ZIC3O60481 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ZIC3O60481 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ZIC3O60481 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.27□□□□□ -1.57
ZIC3O60481 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
ZIC3O60481 AL161756.3-201ENST00000641216 2071 ntBASIC5.27□□□□□ -1.57
ZIC3O60481 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ZIC3O60481 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ZIC3O60481 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.27□□□□□ -1.57
ZIC3O60481 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ZIC3O60481 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ZIC3O60481 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
ZIC3O60481 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ZIC3O60481 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ZIC3O60481 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ZIC3O60481 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ZIC3O60481 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.27□□□□□ -1.57
ZIC3O60481 RPL23AP18-201ENST00000416139 468 ntBASIC5.27□□□□□ -1.57
ZIC3O60481 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC5.27□□□□□ -1.57
ZIC3O60481 MTCO2P1-201ENST00000424648 477 ntBASIC5.27□□□□□ -1.57
ZIC3O60481 MTND6P12-201ENST00000428247 522 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms