Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.35□□□□□ -1.39
FOXN3O00409 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
FOXN3O00409 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
FOXN3O00409 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.35□□□□□ -1.39
FOXN3O00409 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
FOXN3O00409 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
FOXN3O00409 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
FOXN3O00409 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
FOXN3O00409 AC012254.3-201ENST00000591183 2117 ntBASIC6.34□□□□□ -1.39
FOXN3O00409 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.34□□□□□ -1.39
FOXN3O00409 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
FOXN3O00409 OR4K17-201ENST00000315543 1032 ntBASIC6.34□□□□□ -1.39
FOXN3O00409 MIR16-2-201ENST00000362117 81 ntBASIC6.34□□□□□ -1.39
FOXN3O00409 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
FOXN3O00409 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
FOXN3O00409 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.34□□□□□ -1.39
FOXN3O00409 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.34□□□□□ -1.39
FOXN3O00409 MIR1275-201ENST00000408770 80 ntBASIC6.34□□□□□ -1.39
FOXN3O00409 RNU2-22P-201ENST00000411266 212 ntBASIC6.34□□□□□ -1.39
FOXN3O00409 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC6.34□□□□□ -1.39
FOXN3O00409 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC6.34□□□□□ -1.39
FOXN3O00409 AL158827.1-201ENST00000416300 391 ntBASIC6.34□□□□□ -1.39
FOXN3O00409 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.34□□□□□ -1.39
FOXN3O00409 VN1R37P-201ENST00000419096 748 ntBASIC6.34□□□□□ -1.39
FOXN3O00409 AC006065.1-201ENST00000422539 802 ntBASIC6.34□□□□□ -1.39
FOXN3O00409 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.34□□□□□ -1.39
FOXN3O00409 AL590399.2-201ENST00000427536 309 ntBASIC6.34□□□□□ -1.39
FOXN3O00409 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.34□□□□□ -1.39
FOXN3O00409 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.34□□□□□ -1.39
FOXN3O00409 AL445928.1-201ENST00000435545 222 ntBASIC6.34□□□□□ -1.39
FOXN3O00409 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC6.34□□□□□ -1.39
FOXN3O00409 FCF1P6-201ENST00000456841 595 ntBASIC6.34□□□□□ -1.39
FOXN3O00409 snoU13.29-201ENST00000459370 104 ntBASIC6.34□□□□□ -1.39
FOXN3O00409 RPL5P13-201ENST00000462840 709 ntBASIC6.34□□□□□ -1.39
FOXN3O00409 ATP5G1P3-201ENST00000463301 410 ntBASIC6.34□□□□□ -1.39
FOXN3O00409 AC104339.1-201ENST00000465478 348 ntBASIC6.34□□□□□ -1.39
FOXN3O00409 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.34□□□□□ -1.39
FOXN3O00409 AL117692.1-201ENST00000494283 713 ntBASIC6.34□□□□□ -1.39
FOXN3O00409 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.34□□□□□ -1.39
FOXN3O00409 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC6.34□□□□□ -1.39
FOXN3O00409 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC6.34□□□□□ -1.39
FOXN3O00409 RN7SKP34-201ENST00000516142 244 ntBASIC6.34□□□□□ -1.39
FOXN3O00409 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.34□□□□□ -1.39
FOXN3O00409 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.34□□□□□ -1.39
FOXN3O00409 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.34□□□□□ -1.39
FOXN3O00409 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
FOXN3O00409 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC6.34□□□□□ -1.39
FOXN3O00409 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.34□□□□□ -1.39
FOXN3O00409 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.34□□□□□ -1.39
FOXN3O00409 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC6.34□□□□□ -1.39
FOXN3O00409 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
FOXN3O00409 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC6.34□□□□□ -1.39
FOXN3O00409 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.34□□□□□ -1.39
FOXN3O00409 MIR6809-201ENST00000612189 116 ntBASIC6.34□□□□□ -1.39
FOXN3O00409 AL021918.2-201ENST00000613415 194 ntBASIC6.34□□□□□ -1.39
FOXN3O00409 AC018926.1-201ENST00000616335 435 ntBASIC6.34□□□□□ -1.39
FOXN3O00409 AL445528.2-201ENST00000620582 470 ntBASIC6.34□□□□□ -1.39
FOXN3O00409 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
FOXN3O00409 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.34□□□□□ -1.39
FOXN3O00409 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.34□□□□□ -1.39
FOXN3O00409 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
FOXN3O00409 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
FOXN3O00409 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
FOXN3O00409 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
FOXN3O00409 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
FOXN3O00409 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.33□□□□□ -1.4
FOXN3O00409 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.33□□□□□ -1.4
FOXN3O00409 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.33□□□□□ -1.4
FOXN3O00409 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.33□□□□□ -1.4
FOXN3O00409 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.33□□□□□ -1.4
FOXN3O00409 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
FOXN3O00409 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
FOXN3O00409 KYNUP3-201ENST00000574386 1341 ntBASIC6.33□□□□□ -1.4
FOXN3O00409 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
FOXN3O00409 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
FOXN3O00409 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
FOXN3O00409 RAD1P1-201ENST00000231383 813 ntBASIC6.33□□□□□ -1.4
FOXN3O00409 SELENOWP1-201ENST00000322792 252 ntBASIC6.33□□□□□ -1.4
FOXN3O00409 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.33□□□□□ -1.4
FOXN3O00409 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
FOXN3O00409 RN7SKP128-201ENST00000364270 303 ntBASIC6.33□□□□□ -1.4
FOXN3O00409 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.33□□□□□ -1.4
FOXN3O00409 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
FOXN3O00409 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
FOXN3O00409 RSL24D1P1-201ENST00000404972 493 ntBASIC6.33□□□□□ -1.4
FOXN3O00409 RPL26P37-201ENST00000411983 438 ntBASIC6.33□□□□□ -1.4
FOXN3O00409 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.33□□□□□ -1.4
FOXN3O00409 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.33□□□□□ -1.4
FOXN3O00409 AC021876.1-201ENST00000425959 359 ntBASIC6.33□□□□□ -1.4
FOXN3O00409 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC6.33□□□□□ -1.4
FOXN3O00409 DSTNP5-201ENST00000427921 523 ntBASIC6.33□□□□□ -1.4
FOXN3O00409 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC6.33□□□□□ -1.4
FOXN3O00409 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC6.33□□□□□ -1.4
FOXN3O00409 BMS1P10-201ENST00000443754 1120 ntBASIC6.33□□□□□ -1.4
FOXN3O00409 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.33□□□□□ -1.4
FOXN3O00409 AC239798.3-201ENST00000454459 408 ntBASIC6.33□□□□□ -1.4
FOXN3O00409 NPM1P29-201ENST00000483112 803 ntBASIC6.33□□□□□ -1.4
FOXN3O00409 AC008410.1-201ENST00000483777 339 ntBASIC6.33□□□□□ -1.4
FOXN3O00409 RN7SL205P-201ENST00000490174 284 ntBASIC6.33□□□□□ -1.4
FOXN3O00409 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms