Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 PNKDP1-201ENST00000435914 430 ntBASIC5.45□□□□□ -1.54
PDLIM1O00151 OR3D1P-201ENST00000438288 955 ntBASIC5.45□□□□□ -1.54
PDLIM1O00151 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.45□□□□□ -1.54
PDLIM1O00151 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.45□□□□□ -1.54
PDLIM1O00151 AC004129.2-201ENST00000457229 287 ntBASIC5.45□□□□□ -1.54
PDLIM1O00151 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.45□□□□□ -1.54
PDLIM1O00151 AC091544.1-201ENST00000484702 348 ntBASIC5.45□□□□□ -1.54
PDLIM1O00151 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.45□□□□□ -1.54
PDLIM1O00151 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.45□□□□□ -1.54
PDLIM1O00151 ARL4AP1-201ENST00000503220 705 ntBASIC5.45□□□□□ -1.54
PDLIM1O00151 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PDLIM1O00151 RN7SKP70-201ENST00000516655 271 ntBASIC5.45□□□□□ -1.54
PDLIM1O00151 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.45□□□□□ -1.54
PDLIM1O00151 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.45□□□□□ -1.54
PDLIM1O00151 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.45□□□□□ -1.54
PDLIM1O00151 AC021269.1-201ENST00000526860 705 ntBASIC5.45□□□□□ -1.54
PDLIM1O00151 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.45□□□□□ -1.54
PDLIM1O00151 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PDLIM1O00151 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.45□□□□□ -1.54
PDLIM1O00151 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.45□□□□□ -1.54
PDLIM1O00151 MRPS21P8-201ENST00000569196 235 ntBASIC5.45□□□□□ -1.54
PDLIM1O00151 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.45□□□□□ -1.54
PDLIM1O00151 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.45□□□□□ -1.54
PDLIM1O00151 HIRAP1-201ENST00000605318 787 ntBASIC5.45□□□□□ -1.54
PDLIM1O00151 AC010632.3-201ENST00000611377 369 ntBASIC5.45□□□□□ -1.54
PDLIM1O00151 AC022960.2-201ENST00000616300 666 ntBASIC5.45□□□□□ -1.54
PDLIM1O00151 AC022106.2-201ENST00000620114 757 ntBASIC5.45□□□□□ -1.54
PDLIM1O00151 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.45□□□□□ -1.54
PDLIM1O00151 MIPEPP2-201ENST00000422560 1819 ntBASIC5.45□□□□□ -1.54
PDLIM1O00151 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.45□□□□□ -1.54
PDLIM1O00151 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PDLIM1O00151 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PDLIM1O00151 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.45□□□□□ -1.54
PDLIM1O00151 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.45□□□□□ -1.54
PDLIM1O00151 AC104966.1-201ENST00000467010 1464 ntBASIC5.45□□□□□ -1.54
PDLIM1O00151 AC083843.2-201ENST00000568248 6253 ntBASIC5.45□□□□□ -1.54
PDLIM1O00151 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
PDLIM1O00151 AC104623.2-202ENST00000623477 4002 ntBASIC5.45□□□□□ -1.54
PDLIM1O00151 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
PDLIM1O00151 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDLIM1O00151 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDLIM1O00151 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
PDLIM1O00151 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
PDLIM1O00151 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PDLIM1O00151 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PDLIM1O00151 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDLIM1O00151 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
PDLIM1O00151 SNORA21-201ENST00000362423 132 ntBASIC5.44□□□□□ -1.54
PDLIM1O00151 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
PDLIM1O00151 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.44□□□□□ -1.54
PDLIM1O00151 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.44□□□□□ -1.54
PDLIM1O00151 CXADRP1-201ENST00000398098 1095 ntBASIC5.44□□□□□ -1.54
PDLIM1O00151 VDAC2P1-201ENST00000399358 958 ntBASIC5.44□□□□□ -1.54
PDLIM1O00151 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.44□□□□□ -1.54
PDLIM1O00151 AC130360.1-201ENST00000425489 1117 ntBASIC5.44□□□□□ -1.54
PDLIM1O00151 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.44□□□□□ -1.54
PDLIM1O00151 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.44□□□□□ -1.54
PDLIM1O00151 RPS12P17-201ENST00000438591 377 ntBASIC5.44□□□□□ -1.54
PDLIM1O00151 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.44□□□□□ -1.54
PDLIM1O00151 EIF5AP4-201ENST00000441206 465 ntBASIC5.44□□□□□ -1.54
PDLIM1O00151 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.44□□□□□ -1.54
PDLIM1O00151 ZNF619P1-201ENST00000446539 752 ntBASIC5.44□□□□□ -1.54
PDLIM1O00151 RPL7L1P1-201ENST00000448259 785 ntBASIC5.44□□□□□ -1.54
PDLIM1O00151 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.44□□□□□ -1.54
PDLIM1O00151 PPIAP7-201ENST00000454070 489 ntBASIC5.44□□□□□ -1.54
PDLIM1O00151 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.44□□□□□ -1.54
PDLIM1O00151 AC104164.1-201ENST00000460282 590 ntBASIC5.44□□□□□ -1.54
PDLIM1O00151 AC011853.1-201ENST00000518911 454 ntBASIC5.44□□□□□ -1.54
PDLIM1O00151 IGKV3D-25-201ENST00000519599 235 ntBASIC5.44□□□□□ -1.54
PDLIM1O00151 AC009879.1-201ENST00000520029 839 ntBASIC5.44□□□□□ -1.54
PDLIM1O00151 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.44□□□□□ -1.54
PDLIM1O00151 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.44□□□□□ -1.54
PDLIM1O00151 OR56A7P-201ENST00000524865 941 ntBASIC5.44□□□□□ -1.54
PDLIM1O00151 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PDLIM1O00151 AC130365.2-201ENST00000525882 1201 ntBASIC5.44□□□□□ -1.54
PDLIM1O00151 AP000620.1-201ENST00000527147 504 ntBASIC5.44□□□□□ -1.54
PDLIM1O00151 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.44□□□□□ -1.54
PDLIM1O00151 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.44□□□□□ -1.54
PDLIM1O00151 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.44□□□□□ -1.54
PDLIM1O00151 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.44□□□□□ -1.54
PDLIM1O00151 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.44□□□□□ -1.54
PDLIM1O00151 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
PDLIM1O00151 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
PDLIM1O00151 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.44□□□□□ -1.54
PDLIM1O00151 SYT14P1-202ENST00000600441 1448 ntBASIC5.44□□□□□ -1.54
PDLIM1O00151 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.44□□□□□ -1.54
PDLIM1O00151 AL008729.2-201ENST00000606393 473 ntBASIC5.44□□□□□ -1.54
PDLIM1O00151 AP001437.1-201ENST00000608783 456 ntBASIC5.44□□□□□ -1.54
PDLIM1O00151 CXADRP3-202ENST00000617265 1100 ntBASIC5.44□□□□□ -1.54
PDLIM1O00151 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDLIM1O00151 AC073592.6-201ENST00000624271 415 ntBASIC5.44□□□□□ -1.54
PDLIM1O00151 AP001052.1-201ENST00000626421 99 ntBASIC5.44□□□□□ -1.54
PDLIM1O00151 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.44□□□□□ -1.54
PDLIM1O00151 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDLIM1O00151 FBXL21-201ENST00000297158 1305 ntBASIC5.44□□□□□ -1.54
PDLIM1O00151 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDLIM1O00151 STX3-208ENST00000641815 3236 ntBASIC5.44□□□□□ -1.54
PDLIM1O00151 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDLIM1O00151 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
PDLIM1O00151 AP004607.3-201ENST00000530354 3915 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms